contig_metadata
5 rows where bioproject = "PRJEB27957", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3849588 | 3849588 | PRJEB27957_P_NODE_41564_length_249_cov_1.300000_g41454_i0 | PRJEB27957 | 41564 | 249 | 1.3 | 3.237 | Candidatus Jettenia caeni | 247490 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2556874801|gb|CP129467.1| | 247490 | g41454 | i0 | 100 | 0.116465863453815 | 29 | 0 | 12 | 0 | 196 | 224 | 2781580 | 2781608 | MAG: Candidatus Jettenia caeni isolate YC-1 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Brocadiaceae | Candidatus Jettenia | Candidatus Jettenia caeni | |
| 19148916 | 19148916 | PRJEB27957_P_NODE_52716_length_227_cov_1.168539_g52606_i0 | PRJEB27957 | 52716 | 227 | 1.168539 | 2.65258353 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g52606 | i0 | 100 | 0.127753303964758 | 29 | 0 | 13 | 0 | 33 | 61 | 4471859 | 4471887 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 27538828 | 27538828 | PRJEB27957_P_NODE_68304_length_205_cov_1.333333_g68194_i0 | PRJEB27957 | 68304 | 205 | 1.333333 | 2.73333265 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 43.1 | 0.0169 | NR | RZO63680.1 | 2026777 | g68194 | i0 | 44.2 | 0.629268292682927 | 43 | 24 | 62.9 | 0 | 165 | 37 | 19 | 61 | RZO63680.1 MAG: hypothetical protein EVA78_05740 [Phycisphaeraceae bacterium] | diamond | 129 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 31803034 | 31803034 | PRJEB27957_P_NODE_78297_length_193_cov_1.583333_g78187_i0 | PRJEB27957 | 78297 | 193 | 1.583333 | 3.05583269 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 41.6 | 0.0474 | NR | MBN2448429.1 | 2026778 | g78187 | i0 | 56.8 | 0.575129533678757 | 37 | 12 | 57.5 | 1 | 170 | 60 | 277 | 309 | MBN2448429.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 111 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 32467873 | 32467873 | PRJEB27957_P_NODE_70919_length_202_cov_1.019608_g70809_i0 | PRJEB27957 | 70919 | 202 | 1.019608 | 2.05960816 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 42.7 | 0.0222 | NR | HEV3418293.1 | 2715253 | g70809 | i0 | 60.7 | 0.415841584158416 | 28 | 11 | 41.6 | 0 | 202 | 119 | 113 | 140 | HEV3418293.1 chemotaxis protein CheB [Pirellulales bacterium] | diamond | 84 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;