RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB27957", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 5 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 5 ✖

bioproject 1

  • PRJEB27957 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1297621 1297621 PRJEB27957_P_NODE_106842_length_168_cov_0.873950_g106732_i0 PRJEB27957 106842 168 0.87395 1.468236 Amphimedon queenslandica 400682 Porifera other_Eukaryota 54.7 0.004   NTclustered gi|1133458631|ref|XM_003385672.3| 400682 g106732 i0 100 0.345238095238095 29 0 17 0 82 110 1014 986 PREDICTED: Amphimedon queenslandica cathepsin Z-like (LOC100638168), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
7675683 7675683 PRJEB27957_P_NODE_65907_length_208_cov_1.308176_g65797_i0 PRJEB27957 65907 208 1.308176 2.72100608 Amphimedon queenslandica 400682 Porifera other_Eukaryota 56.5 0.001   NTclustered gi|1133469140|ref|XM_019999151.1| 400682 g65797 i0 100 0.144230769230769 30 0 14 0 73 102 1244 1273 PREDICTED: Amphimedon queenslandica uncharacterized LOC109583713 (LOC109583713), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
20424142 20424142 PRJEB27957_P_NODE_94617_length_177_cov_1.054688_g94507_i0 PRJEB27957 94617 177 1.054688 1.86679776 Corticium candelabrum 121492 Porifera other_Eukaryota 62.1 2.48e-5   NTclustered gi|2664237473|ref|XM_062658683.1| 121492 g94507 i0 97.222 2.61581920903955 36 1 20 0 7 42 725 760 PREDICTED: Corticium candelabrum keratin-associated protein 5-1-like (LOC134190242), mRNA blastn 463 62.1 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
22975362 22975362 PRJEB27957_P_NODE_25339_length_301_cov_2.269841_g25229_i0 PRJEB27957 25339 301 2.269841 6.83222141 Dysidea avara 196820 Porifera other_Eukaryota 52.8 0.028   NTclustered gi|2749514141|ref|XM_066026279.1| 196820 g25229 i0 100 0.27906976744186 28 0 9 0 29 56 3314 3341 PREDICTED: Dysidea avara uncharacterized protein (LOC136236171), transcript variant X2, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
30974737 30974737 PRJEB27957_P_NODE_84634_length_187_cov_1.130435_g84524_i0 PRJEB27957 84634 187 1.130435 2.11391345 Metazoa 33208 Porifera other_Eukaryota 55.1 7.8e-7   NR XP_065887592.1 196820 g84524 i0 82.1 8.13368983957219 28 5 44.9 0 67 150 297 324 XP_065887592.1 uncharacterized protein [Dysidea avara] diamond 1521 55.1 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;