RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB25789", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB25789 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11501190 11501190 PRJEB25789_S_NODE_17890_length_247_cov_0.885057_g17811_i0 PRJEB25789 17890 247 0.885057 2.18609079 Anneissia japonica 1529436 Echinodermata other_Eukaryota 105 7.38e-26   NR XP_033121043.1 1529436 g17811 i0 58 3.78947368421053 81 31 94.7 1 234 1 132 212 XP_033121043.1 thioredoxin domain-containing protein 5-like [Anneissia japonica] diamond 936 105 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
31613395 31613395 PRJEB25789_S_NODE_7776_length_335_cov_1.396947_g7697_i0 PRJEB25789 7776 335 1.396947 4.67977245 Diadema antillarum 105358 Echinodermata other_Eukaryota 147 5.4e-40   NR XP_071505606.1 105358 g7697 i0 69.4 13.6746268656716 111 34 99.4 0 333 1 229 339 XP_071505606.1 3-ketoacyl-CoA thiolase, mitochondrial-like [Diadema antillarum] diamond 4581 147 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;