RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB25789" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJEB25789 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29622166 29622166 PRJEB25789_S_NODE_11790_length_287_cov_1.308411_g11711_i0 PRJEB25789 11790 287 1.308411 3.75513957 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 124 2.97e-31   NR KAG8463698.1 2081491 g11711 i0 60.6 2.91637630662021 94 35 96.2 1 11 286 23 116 KAG8463698.1 hypothetical protein KFE25_003971 [Diacronema lutheri] diamond 837 124 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
30538675 30538675 PRJEB25789_S_NODE_6773_length_354_cov_1.185053_g6694_i0 PRJEB25789 6773 354 1.185053 4.19508762 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 70.5 1.89e-11   NR KAJ1619675.1 483367 g6694 i0 41.3 0.88135593220339 104 47 79.7 5 71 352 121 220 KAJ1619675.1 hypothetical protein T492DRAFT_1083924 [Pavlovales sp. CCMP2436] diamond 312 70.5 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;