RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB25789" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB25789 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31044576 31044576 PRJEB25789_S_NODE_14215_length_267_cov_1.190722_g14136_i0 PRJEB25789 14215 267 1.190722 3.17922774 Candidatus Eisenbacteria bacterium 2212470 Bacteria Bacteria 43.1 0.0346   NR TMQ57219.1 2212470 g14136 i0 39.7 0.707865168539326 63 32 64 2 239 69 32 94 TMQ57219.1 MAG: glycosyltransferase family 4 protein [Candidatus Eiseniibacteriota bacterium] diamond 189 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
32562802 32562802 PRJEB25789_S_NODE_9339_length_313_cov_1.283333_g9260_i0 PRJEB25789 9339 313 1.283333 4.01683229 Candidatus Babeliaceae bacterium 2545253 Bacteria Bacteria 47.4 0.00197   NR HVW99877.1 2545253 g9260 i0 29.8 0.996805111821086 104 69 99.7 3 1 312 301 400 HVW99877.1 hypothetical protein [Candidatus Babeliaceae bacterium] diamond 312 47.4 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae   Candidatus Babeliaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;