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contig_metadata

16 rows where bioproject = "PRJEB25583" and tax_phylum = "Arthropoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB25583 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5125406 5125406 PRJEB25583_P_NODE_5985_length_170_cov_1.451128_g5808_i0 PRJEB25583 5985 170 1.451128 2.4669176 Artemia franciscana 6661 Arthropoda Arthropoda 292 7.69e-75   NTclustered gi|2743025003|ref|XR_010621486.1| 6661 g5808 i0 97.647 24.6882352941176 170 4 100 0 1 170 576 745 PREDICTED: Artemia franciscana nitric oxide synthase 1-like (LOC136042911), transcript variant X2, misc_RNA blastn 4197 292 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
6089518 6089518 PRJEB25583_P_NODE_4025_length_202_cov_2.739394_g3848_i0 PRJEB25583 4025 202 2.739394 5.53357588 Artemia 6660 Arthropoda Arthropoda 374 3.3e-99   NTclustered gi|2295022767|gb|OP365120.1| 6661 g3848 i0 100 100.237623762376 202 0 100 0 1 202 210 9 Artemia franciscana isolate soni103 small subunit ribosomal RNA gene, partial sequence blastn 20248 374 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
6401135 6401135 PRJEB25583_P_NODE_5986_length_170_cov_1.443609_g5809_i0 PRJEB25583 5986 170 1.443609 2.4541353 Penaeus chinensis 139456 Arthropoda Arthropoda 62.1 2.36e-5   NTclustered gi|2220187893|ref|XM_047618202.1| 139456 g5809 i0 100 15.4764705882353 33 0 19 0 27 59 1000 1032 PREDICTED: Penaeus chinensis probable serine/threonine-protein kinase clkA (LOC125028722), partial mRNA blastn 2631 62.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Penaeidae Penaeus Penaeus chinensis
7675255 7675255 PRJEB25583_P_NODE_3867_length_206_cov_1.810651_g3690_i0 PRJEB25583 3867 206 1.810651 3.72994106 Cotesia chilonis 89804 Arthropoda Arthropoda 145 2.89e-30   NTclustered gi|2129410486|gb|MW299760.1| 89804 g3690 i0 81.977 15.2038834951456 172 29 83 2 27 197 60 230 Cotesia chilonis egg surface protein ES-54 mRNA, partial cds blastn 3132 145 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Braconidae Cotesia Cotesia chilonis
7675265 7675265 PRJEB25583_P_NODE_4967_length_184_cov_1.693878_g4790_i0 PRJEB25583 4967 184 1.693878 3.11673552 Cricotopus sp. 2 SRM-2010 891489 Arthropoda Arthropoda 291 3.05e-74   NTclustered gi|346681867|gb|HQ440581.1| 891489 g4790 i0 95.109 81.6141304347826 184 9 100 0 1 184 402 585 Cricotopus sp. 2 SRM-2010 voucher CAM04 18S ribosomal RNA gene, partial sequence blastn 15017 291 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Cricotopus Cricotopus sp. 2 SRM-2010
9914557 9914557 PRJEB25583_P_NODE_3288_length_223_cov_2.553763_g3111_i0 PRJEB25583 3288 223 2.553763 5.69489149 Chironomidae 7149 Arthropoda Arthropoda 387 4.779999999999998e-103   NTclustered gi|38422425|emb|AJ586562.1| 59808 g3111 i0 98.624 96.7892376681614 218 3 98 0 1 218 2169 1952 Acricotopus lucens partial 28S rRNA gene, clone AlSo28S-42 blastn 21584 387 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Acricotopus Acricotopus lucens
9914567 9914567 PRJEB25583_P_NODE_4088_length_201_cov_1.847561_g3911_i0 PRJEB25583 4088 201 1.847561 3.71359761 Aphididae 27482 Arthropoda Arthropoda 327 2.59e-85   NTclustered gi|2620630428|ref|XR_009661998.1| 40932 g3911 i0 97.906 91.6517412935323 191 0 93 1 15 201 3965 3775 PREDICTED: Rhopalosiphum padi large subunit ribosomal RNA (LOC132928126), rRNA blastn 18422 327 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Rhopalosiphum Rhopalosiphum padi
9914588 9914588 PRJEB25583_P_NODE_6108_length_168_cov_5.145038_g5931_i0 PRJEB25583 6108 168 5.1450379999999996 8.64366384 Brachytrupes 208857 Arthropoda Arthropoda 104 3.84e-18   NTclustered gi|27463971|gb|AF514547.1| 208856 g5931 i0 95.385 35.5952380952381 65 3 39 0 87 151 653 589 Brachytrupes membranaceus 18S ribosomal RNA gene, partial sequence blastn 5980 104 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Orthoptera Gryllidae Brachytrupes Brachytrupes membranaceus
15325137 15325137 PRJEB25583_P_NODE_2913_length_237_cov_8.395000_g2736_i0 PRJEB25583 2913 237 8.395 19.89615 Eukoenenia mirabilis 1539568 Arthropoda Arthropoda 102 2.08e-17   NTclustered gi|746815351|gb|KF823854.1| 1539568 g2736 i0 95.385 27.746835443038 65 2 27 1 21 85 5 68 Eukoenenia mirabilis voucher MCZ:IZ-127901 28S ribosomal RNA gene, partial sequence blastn 6576 102 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Palpigradi Eukoeneniidae Eukoenenia Eukoenenia mirabilis
16599782 16599782 PRJEB25583_P_NODE_1174_length_418_cov_3.010499_g998_i0 PRJEB25583 1174 418 3.010499 12.58388582 Timema monikensis 170555 Arthropoda Arthropoda 58.4 8.65e-4   NTclustered gi|1946411097|emb|OB793204.1| 170555 g998 i0 97.059 0.215311004784689 34 1 8 0 99 132 168510 168543 3_Tms_b3v08 blastn 90 58.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema monikensis
17564256 17564256 PRJEB25583_P_NODE_2314_length_270_cov_4.334764_g2137_i0 PRJEB25583 2314 270 4.334764 11.7038628 Isotomidae 36141 Arthropoda Arthropoda 102 2.42e-17   NTclustered gi|388565132|gb|JN981050.1| 281420 g2137 i0 89.873 1.86296296296296 79 8 29 0 185 263 2113 2191 Folsomia quadrioculata voucher Potapov 0904 28S ribosomal RNA gene, partial sequence blastn 503 102 1 Eukaryota Opisthokonta Metazoa Arthropoda Collembola Entomobryomorpha Isotomidae Folsomia Folsomia quadrioculata
17874583 17874583 PRJEB25583_P_NODE_2935_length_237_cov_1.520000_g2758_i0 PRJEB25583 2935 237 1.52 3.6024 Sipha flava 143950 Arthropoda Arthropoda 246 9.09e-61   NTclustered gi|1418918320|ref|XM_025560906.1| 143950 g2758 i0 85.532 1.9789029535865 235 34 99 0 1 235 385 151 PREDICTED: Sipha flava uncharacterized LOC112687919 (LOC112687919), mRNA blastn 469 246 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Sipha Sipha flava
18838234 18838234 PRJEB25583_P_NODE_2955_length_236_cov_2.030151_g2778_i0 PRJEB25583 2955 236 2.030151 4.79115636 Artemia 6660 Arthropoda Arthropoda 414 2.34e-111   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g2778 i0 98.305 38.0508474576271 236 4 100 0 1 236 100 335 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 8980 414 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
19148486 19148486 PRJEB25583_P_NODE_6956_length_160_cov_1.951220_g6779_i0 PRJEB25583 6956 160 1.95122 3.121952 Lipaphis pseudobrassicae 511022 Arthropoda Arthropoda 289 9.29e-74   NTclustered gi|2459370135|ref|NC_072150.1| 511022 g6779 i0 99.371 100.3875 159 1 99 0 2 160 14800 14642 Lipaphis pseudobrassicae mitochondrion, complete genome blastn 16062 289 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Lipaphis Lipaphis pseudobrassicae
21699716 21699716 PRJEB25583_P_NODE_6178_length_168_cov_1.152672_g6001_i0 PRJEB25583 6178 168 1.152672 1.93648896 Nephila pilipes 299642 Arthropoda Arthropoda 96.3 4.38e-23   NR GFS30523.1 299642 g6001 i0 85.2 2.91071428571429 54 8 96.4 0 167 6 73 126 GFS30523.1 40S ribosomal protein S4 [Nephila pilipes] diamond 489 96.3 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Nephila Nephila pilipes
27191090 27191090 PRJEB25583_P_NODE_2662_length_250_cov_1.093897_g2485_i0 PRJEB25583 2662 250 1.093897 2.7347425 Chironomus tepperi 113505 Arthropoda Arthropoda 156 7.65e-44   NR XP_070490260.1 113505 g2485 i0 86.6 0.984 82 11 98.4 0 249 4 65 146 XP_070490260.1 chitobiosyldiphosphodolichol beta-mannosyltransferase [Chironomus tepperi] diamond 246 156 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Chironomus Chironomus tepperi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;