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contig_metadata

24 rows where bioproject = "PRJEB25583", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 24 ✖

tax_clade 1

  • Sar · 24 ✖

bioproject 1

  • PRJEB25583 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
986432 986432 PRJEB25583_P_NODE_5121_length_181_cov_73.486111_g4944_i0 PRJEB25583 5121 181 73.486111 133.00986091 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 320 3.82e-83   NTclustered gi|10782|emb|X54004.1| 5908 g4944 i0 99.432 95.5635359116022 176 1 97 0 6 181 3129 2954 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 17297 320 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
1297196 1297196 PRJEB25583_P_NODE_3702_length_210_cov_3.497110_g3525_i0 PRJEB25583 3702 210 3.49711 7.343931 Pseudovorticella sp. 1 LZ54 2042499 SAR_Eukaryotes SAR_Eukaryotes 102 1.8e-17   NTclustered gi|1251948967|gb|KY675200.1| 2042499 g3525 i0 91.781 34.9714285714286 73 6 35 0 138 210 229 301 Pseudovorticella sp. 1 LZ54 large subunit ribosomal RNA gene, partial sequence blastn 7344 102 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Pseudovorticella Pseudovorticella sp. 1 LZ54
1297210 1297210 PRJEB25583_P_NODE_5942_length_170_cov_4.308271_g5765_i0 PRJEB25583 5942 170 4.308271 7.3240607 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 213 6.16e-51   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g5765 i0 90.625 73.3 160 15 94 0 4 163 4953 4794 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12461 213 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
2572853 2572853 PRJEB25583_P_NODE_1603_length_338_cov_24.458472_g1426_i0 PRJEB25583 1603 338 24.458472 82.66963536 Uronema marinum 35107 SAR_Eukaryotes SAR_Eukaryotes 324 6.12e-84   NTclustered gi|111035919|emb|AJ781304.1| 35107 g1426 i0 85.806 91.896449704142 310 39 91 5 21 326 51 359 Uronema marinum partial 23S rRNA gene, strain CCAP 1686/1 blastn 31061 324 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Uronematidae Uronema Uronema marinum
4814274 4814274 PRJEB25583_P_NODE_5544_length_175_cov_4.362319_g5367_i0 PRJEB25583 5544 175 4.362319 7.63405825 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 287 3.71e-73   NTclustered gi|651208247|gb|KJ028501.1| 2814637 g5367 i0 100 88.6171428571429 155 0 89 0 1 155 237 83 Tetrahymena frigidoflumine clone 20149-1 18S small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 15508 287 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena frigidoflumine
5125374 5125374 PRJEB25583_P_NODE_2125_length_284_cov_8.364372_g1948_i0 PRJEB25583 2125 284 8.364372 23.75481648 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 460 3.68e-125   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g1948 i0 95.848 91.9683098591549 289 4 99 2 1 281 538 826 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 26119 460 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
7364106 7364106 PRJEB25583_P_NODE_2026_length_293_cov_29.234375_g1849_i0 PRJEB25583 2026 293 29.234375 85.65671875 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 529 1.0299999999999996e-145   NTclustered gi|363412163|gb|JN120237.1| 1126580 g1849 i0 100 97.6075085324232 286 0 98 0 8 293 1256 1541 Vorticella similis isolate 991130906vorspp 18S ribosomal RNA gene, partial sequence blastn 28599 529 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella similis
8639533 8639533 PRJEB25583_P_NODE_6127_length_168_cov_2.038168_g5950_i0 PRJEB25583 6127 168 2.038168 3.42412224 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 257 2.79e-64   NTclustered gi|840836|emb|X65149.1| 40328 g5950 i0 95.625 96.4821428571429 160 7 95 0 9 168 6 165 O.georgiana 17S ribosomal DNA blastn 16209 257 1 Eukaryota Sar   Ciliophora Nassophorea Nassulida Nassulidae Obertrumia Obertrumia georgiana
8949982 8949982 PRJEB25583_P_NODE_3308_length_222_cov_3.508108_g3131_i0 PRJEB25583 3308 222 3.508108 7.78799976 Pleuronema marinum 31280 SAR_Eukaryotes SAR_Eukaryotes 254 5.03e-63   NTclustered gi|402491|gb|M98047.1|PUIRR28S 31280 g3131 i0 94.41 57.6081081081081 161 9 73 0 4 164 359 199 Pleuronema marinum 28S ribosomal RNA (28S rRNA) fragment blastn 12789 254 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Pleuronematidae Pleuronema Pleuronema marinum
10225743 10225743 PRJEB25583_P_NODE_3389_length_219_cov_283.802198_g3212_i0 PRJEB25583 3389 219 283.802198 621.52681362 uncultured Peniculida 765896 SAR_Eukaryotes SAR_Eukaryotes 237 4.9800000000000006e-58   NTclustered gi|1354561752|gb|MH023121.1| 765896 g3212 i0 97.143 65.3059360730594 140 4 64 0 60 199 167 28 Uncultured Peniculida clone OTU739 small subunit ribosomal RNA gene, partial sequence blastn 14302 237 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida     uncultured Peniculida
10225760 10225760 PRJEB25583_P_NODE_5389_length_177_cov_3.185714_g5212_i0 PRJEB25583 5389 177 3.185714 5.63871378 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 158 3.0799999999999998e-34   NTclustered gi|49616744|gb|AY643504.1| 282688 g5212 i0 85.35 6.86440677966102 157 17 86 6 24 176 275 121 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 1215 158 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
11501029 11501029 PRJEB25583_P_NODE_7670_length_155_cov_1.271186_g7493_i0 PRJEB25583 7670 155 1.271186 1.9703383 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.62e-5   NTclustered gi|1583998227|gb|MH444694.1| 282688 g7493 i0 97.143 0.225806451612903 35 1 23 0 121 155 1347 1313 Philasterides dicentrarchi I1 alpha-tubulin 1 mRNA, complete cds blastn 35 60.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
15325140 15325140 PRJEB25583_P_NODE_3253_length_224_cov_4.754011_g3076_i0 PRJEB25583 3253 224 4.754011 10.64898464 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 187 5.229999999999998e-43   NTclustered gi|1004125725|gb|KU761582.1| 153251 g3076 i0 83.412 66.3883928571429 211 25 92 9 19 224 6845 7050 Cryptocaryon irritans isolate ND1410 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and intergenic spacer, complete sequence blastn 14871 187 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans
15325145 15325145 PRJEB25583_P_NODE_3693_length_210_cov_14.838150_g3516_i0 PRJEB25583 3693 210 14.83815 31.160115 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 331 2.11e-86   NTclustered gi|1083263100|gb|KX982500.1| 5963 g3516 i0 98.404 54.0476190476191 188 3 90 0 22 209 2239 2426 Stentor coeruleus strain MSU large subunit ribosomal RNA gene, partial sequence blastn 11350 331 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
16289114 16289114 PRJEB25583_P_NODE_3173_length_226_cov_57.941799_g2996_i0 PRJEB25583 3173 226 57.941799 130.94846574 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 313 8.36e-81   NTclustered gi|10782|emb|X54004.1| 5908 g2996 i0 100 78.287610619469 169 0 75 0 1 169 2954 3122 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 17693 313 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
17874585 17874585 PRJEB25583_P_NODE_3075_length_231_cov_3.494845_g2898_i0 PRJEB25583 3075 231 3.494845 8.07309195 Mesodinium pulex 283647 SAR_Eukaryotes SAR_Eukaryotes 346 8.45e-91   NTclustered gi|359744455|gb|JN412740.1| 283647 g2898 i0 94.619 67.8658008658009 223 12 97 0 1 223 2113 1891 Mesodinium pulex strain HHJ 18S small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer and 5.8S ribosomal RNA gene, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence blastn 15677 346 1 Eukaryota Sar   Ciliophora Litostomatea Cyclotrichida Mesodiniidae Mesodinium Mesodinium pulex
19148489 19148489 PRJEB25583_P_NODE_756_length_561_cov_46.272901_g587_i0 PRJEB25583 756 561 46.272901 259.59097461 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 743 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g587 i0 97.902 73.445632798574 429 9 76 0 101 529 1419 991 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 41203 743 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
20423683 20423683 PRJEB25583_P_NODE_3137_length_228_cov_20.418848_g2960_i0 PRJEB25583 3137 228 20.418848 46.55497344 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 411 2.909999999999999e-110   NTclustered gi|90657141|gb|DQ442799.1| 35100 g2960 i0 100 98.2719298245614 222 0 97 0 1 222 99 320 Cyclidium glaucoma isolate ES18 28S ribosomal RNA gene, partial sequence blastn 22406 411 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
20423700 20423700 PRJEB25583_P_NODE_5317_length_178_cov_9.730496_g5140_i0 PRJEB25583 5317 178 9.730496 17.32028288 Stentor roeselii 1703786 SAR_Eukaryotes SAR_Eukaryotes 292 8.15e-75   NTclustered gi|1700451376|gb|MN160214.1| 1703786 g5140 i0 100 60.0393258426966 158 0 89 0 21 178 572 729 Stentor roeselii strain OK 6 small subunit ribosomal RNA gene, partial sequence blastn 10687 292 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor roeselii
21699703 21699703 PRJEB25583_P_NODE_3278_length_223_cov_26.774194_g3101_i0 PRJEB25583 3278 223 26.774194 59.70645262 Stentor roeselii 1703786 SAR_Eukaryotes SAR_Eukaryotes 363 8.049999999999997e-96   NTclustered gi|921061859|gb|KP970274.1| 1703786 g3101 i0 99.01 65.7847533632287 202 2 91 0 1 202 306 105 Stentor roeselii isolate STR large subunit ribosomal RNA gene, partial sequence blastn 14670 363 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor roeselii
24248800 24248800 PRJEB25583_P_NODE_2060_length_290_cov_9.138340_g1883_i0 PRJEB25583 2060 290 9.13834 26.501186 Lembadion sp. FG-2015 1607877 SAR_Eukaryotes SAR_Eukaryotes 436 6.349999999999999e-118   NTclustered gi|759083556|gb|KM222173.1| 1607877 g1883 i0 96.241 88.5413793103448 266 10 92 0 22 287 75 340 Lembadion sp. FG-2015 voucher FYB2013031305 large subunit ribosomal RNA gene, partial sequence blastn 25677 436 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Lembadionidae Lembadion Lembadion sp. FG-2015
25212544 25212544 PRJEB25583_P_NODE_4880_length_185_cov_9.439189_g4703_i0 PRJEB25583 4880 185 9.439189 17.46249965 Plagiocampa 1348341 SAR_Eukaryotes SAR_Eukaryotes 243 8.73e-60   NTclustered gi|643012177|gb|KF541344.1| 187299 g4703 i0 90.659 67.0108108108108 182 17 98 0 4 185 915 734 Uncultured ciliate clone E06_757_MCM2_1_LSU internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12397 243 1 Eukaryota Sar   Ciliophora         uncultured ciliate
28896295 28896295 PRJEB25583_P_NODE_6068_length_169_cov_1.469697_g5891_i0 PRJEB25583 6068 169 1.469697 2.48378793 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 96.7 7.53e-24   NR CAD8103391.1 65129 g5891 i0 90.7 1.91715976331361 54 5 95.9 0 6 167 89 142 CAD8103391.1 unnamed protein product [Paramecium sonneborni] diamond 324 96.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
29647357 29647357 PRJEB25583_P_NODE_7390_length_157_cov_1.291667_g7213_i0 PRJEB25583 7390 157 1.291667 2.02791719 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 94.4 4.2e-22   NR XP_004037237.1 5932 g7213 i0 86.5 7.94904458598726 52 7 99.4 0 157 2 158 209 XP_004037237.1 hypothetical protein IMG5_058070 [Ichthyophthirius multifiliis] diamond 1248 94.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;