contig_metadata
7 rows where bioproject = "PRJEB25583" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5125396 | 5125396 | PRJEB25583_P_NODE_4705_length_189_cov_1.309211_g4528_i0 | PRJEB25583 | 4705 | 189 | 1.309211 | 2.47440879 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 294 | 2.44e-75 | NTclustered | gi|2874253799|emb|OY969783.1| | 2876886 | g4528 | i0 | 94.709 | 164.486772486772 | 189 | 10 | 100 | 0 | 1 | 189 | 2502446 | 2502634 | MAG: Tepidisphaeraceae bacterium isolate MFD04580.bin.c.1 genome assembly, chromosome: 1 | blastn | 31088 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 8949966 | 8949966 | PRJEB25583_P_NODE_1348_length_380_cov_2.763848_g1172_i0 | PRJEB25583 | 1348 | 380 | 2.763848 | 10.5026224 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 571 | 2.2499999999999996e-158 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g1172 | i0 | 93.75 | 156.302631578947 | 384 | 18 | 100 | 6 | 1 | 380 | 3832398 | 3832779 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 59395 | 571 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10225773 | 10225773 | PRJEB25583_P_NODE_7629_length_155_cov_1.669492_g7452_i0 | PRJEB25583 | 7629 | 155 | 1.669492 | 2.5877126 | Poriferisphaera corsica | 2528020 | Bacteria | Bacteria | 165 | 1.57e-36 | NTclustered | gi|1712598971|gb|CP036425.1| | 2528020 | g7452 | i0 | 90.476 | 38.7612903225806 | 126 | 10 | 81 | 2 | 2 | 126 | 3163771 | 3163895 | Poriferisphaera corsica strain KS4 chromosome, complete genome | blastn | 6008 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Poriferisphaera | Poriferisphaera corsica | |
| 11189793 | 11189793 | PRJEB25583_P_NODE_7389_length_157_cov_1.291667_g7212_i0 | PRJEB25583 | 7389 | 157 | 1.291667 | 2.02791719 | Isosphaera | 127 | Bacteria | Bacteria | 163 | 5.74e-36 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g7212 | i0 | 85.987 | 13.6687898089172 | 157 | 17 | 100 | 4 | 1 | 157 | 1242 | 1091 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 2146 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 27254298 | 27254298 | PRJEB25583_P_NODE_8143_length_152_cov_1.104348_g7966_i0 | PRJEB25583 | 8143 | 152 | 1.104348 | 1.67860896 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 41.6 | 0.0273 | NR | MBA3761743.1 | 2201154 | g7966 | i0 | 44.9 | 0.967105263157895 | 49 | 25 | 92.8 | 1 | 8 | 148 | 141 | 189 | MBA3761743.1 hypothetical protein [Chthoniobacterales bacterium] | diamond | 147 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 28321591 | 28321591 | PRJEB25583_P_NODE_6266_length_167_cov_1.184615_g6089_i0 | PRJEB25583 | 6266 | 167 | 1.184615 | 1.97830705 | PVC group | 1783257 | Bacteria | Bacteria | 95.9 | 1.66e-22 | NR | NHZ84895.1 | 2052181 | g6089 | i0 | 72.2 | 2.89221556886228 | 54 | 15 | 97 | 0 | 166 | 5 | 103 | 156 | NHZ84895.1 RNase H superfamily protein [Planctomycetia bacterium] | diamond | 483 | 95.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 30222688 | 30222688 | PRJEB25583_P_NODE_7832_length_154_cov_1.145299_g7655_i0 | PRJEB25583 | 7832 | 154 | 1.145299 | 1.76376046 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 85.5 | 3.53e-18 | NR | MEI6194176.1 | 2026799 | g7655 | i0 | 80 | 0.974025974025974 | 50 | 10 | 97.4 | 0 | 152 | 3 | 267 | 316 | MEI6194176.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 150 | 85.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;