RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB25583", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 1 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 1 ✖

bioproject 1

  • PRJEB25583 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8949999 8949999 PRJEB25583_P_NODE_5248_length_179_cov_60.204225_g5071_i0 PRJEB25583 5248 179 60.204225 107.76556275 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 281 1.78e-71   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g5071 i0 97.561 75.731843575419 164 4 92 0 13 176 3283 3446 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 13556 281 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;