RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB25583", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJEB25583 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26747858 26747858 PRJEB25583_P_NODE_8081_length_152_cov_1.452174_g7904_i0 PRJEB25583 8081 152 1.452174 2.20730448 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 45.8 8.73e-4   NR MCX6158007.1 2026749 g7904 i0 51.1 0.927631578947368 47 21 92.8 1 144 4 363 407 MCX6158007.1 ATP-binding protein [Ignavibacteriota bacterium] diamond 141 45.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
30191039 30191039 PRJEB25583_P_NODE_3952_length_204_cov_1.401198_g3775_i0 PRJEB25583 3952 204 1.401198 2.85844392 Ignavibacteria bacterium 2053306 Bacteria Bacteria 89.4 3.6100000000000005e-21   NR HMQ80826.1 2053306 g3775 i0 59.7 0.985294117647059 67 27 98.5 0 2 202 19 85 HMQ80826.1 bacillithiol system redox-active protein YtxJ [Ignavibacteria bacterium] diamond 201 89.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32751463 32751463 PRJEB25583_P_NODE_5460_length_177_cov_0.900000_g5283_i0 PRJEB25583 5460 177 0.9 1.593 Ignavibacteria bacterium 2053306 Bacteria Bacteria 85.9 5.21e-18   NR MBK6773423.1 2053306 g5283 i0 93.6 0.796610169491525 47 3 79.7 0 35 175 243 289 MBK6773423.1 hypothetical protein [Ignavibacteria bacterium] diamond 141 85.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;