RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB25583", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB25583 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17564281 17564281 PRJEB25583_P_NODE_5114_length_182_cov_1.062069_g4937_i0 PRJEB25583 5114 182 1.062069 1.93296558 Bacteria 2 Bacteria Bacteria 270 3.93e-68   NTclustered gi|837350690|gb|CP011211.1| 1619070 g4937 i0 93.407 65.3681318681319 182 12 100 0 1 182 851364 851183 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 11897 270 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
27823079 27823079 PRJEB25583_P_NODE_5864_length_171_cov_2.694030_g5687_i0 PRJEB25583 5864 171 2.69403 4.6067913 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 78.2 5.49e-16   NR HEY5268622.1 2973664 g5687 i0 63.2 1 57 20 98.2 1 2 169 96 152 HEY5268622.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 171 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;