RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB2368", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB2368 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3849107 3849107 PRJEB2368_P_NODE_14984_length_158_cov_2.107438_g14665_i0 PRJEB2368 14984 158 2.107438 3.32975204 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 270 3.3099999999999996e-68   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g14665 i0 97.468 1 158 4 100 0 1 158 816 973 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 158 270 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
5125313 5125313 PRJEB2368_P_NODE_5_length_6131_cov_6.273384_g2_i0 PRJEB2368 5 6131 6.273384 384.62117304 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2739 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2 i0 96.938 0.659272549339423 1633 46 66 4 4380 6010 5329 6959 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4042 2739 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
6401043 6401043 PRJEB2368_P_NODE_6_length_6032_cov_6.330108_g2_i1 PRJEB2368 6 6032 6.330108 381.83211456 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2739 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2 i1 96.938 0.646385941644562 1633 46 65 4 122 1752 6959 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 3899 2739 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16599712 16599712 PRJEB2368_P_NODE_1394_length_740_cov_3.320057_g1160_i0 PRJEB2368 1394 740 3.320057 24.5684218 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1105 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1160 i0 97.519 0.871621621621622 645 9 87 2 14 658 2 639 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 645 1105 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;