RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJEB2368" and tax_phylum = "Negarnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJEB2368 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
986368 986368 PRJEB2368_P_NODE_81_length_2400_cov_12.127380_g53_i0 PRJEB2368 81 2400 12.12738 291.05712 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1605 0   NTclustered gi|1565830798|gb|MK474589.1| RQ01 g53 i0 79.523 93.2608333333333 2266 454 94 10 54 2314 1 2261 Influenza B virus (B/Maryland/33/2018) segment 1 polymerase PB1 (PB1) gene, complete cds blastn 223826 1616 0.993193069306931 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
2261574 2261574 PRJEB2368_P_NODE_1402_length_738_cov_3.954351_g1168_i0 PRJEB2368 1402 738 3.954351 29.18311038 Alphainfluenzavirus 197911 Viruses Viruses 553 1.6599999999999993e-152   NTclustered gi|1714608843|gb|MN250926.1| 11320 g1168 i0 100 88.8848238482385 299 0 93 0 67 365 779 481 Influenza A virus (A/MUWRP-Uganda/348/2011(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds blastn 65597 553 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
2261651 2261651 PRJEB2368_P_NODE_342_length_1429_cov_2.676006_g250_i0 PRJEB2368 342 1429 2.676006 38.24012574 Alphainfluenzavirus 197911 Viruses Viruses 2628 0   NTclustered gi|227831765|gb|FJ966955.1| 641807 g250 i0 99.86 100 1429 2 100 0 1 1429 364 1792 Influenza A virus (A/California/05/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 142900 2634 0.997722095671982 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3536881 3536881 PRJEB2368_P_NODE_1883_length_636_cov_3.954925_g1624_i0 PRJEB2368 1883 636 3.954925 25.153323 Alphainfluenzavirus 197911 Viruses Viruses 370 1.54e-97   NTclustered gi|1920167247|gb|MW185783.1| 11320 g1624 i0 100 63.0298742138365 200 0 59 0 94 293 2111 1912 Influenza A virus (A/Lithuania/1167/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 40087 370 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3536948 3536948 PRJEB2368_P_NODE_963_length_888_cov_2.319624_g772_i0 PRJEB2368 963 888 2.319624 20.59826112 Alphainfluenzavirus 197911 Viruses Viruses 1304 0   NTclustered gi|2190753829|gb|OM585551.1| 11320 g772 i0 100 81.0281531531532 706 0 80 0 183 888 1957 1252 Influenza A virus (A/USA/H1-A37S/2021(H1N1)) segment 3 polymerase PA (PA) and PA-X protein (PA-X) genes, complete cds blastn 71953 1304 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3849119 3849119 PRJEB2368_P_NODE_544_length_1151_cov_155.050269_g412_i0 PRJEB2368 544 1151 155.050269 1784.62859619 Zebrafish influenza B-like virus RQ01 Viruses Viruses 534 9.55e-147   NTclustered gi|8486161|ref|NC_002211.1| RQ01 g412 i0 75.871 95.4526498696785 1119 230 96 35 21 1123 1096 2 Influenza B virus (B/Lee/1940) segment 8, complete sequence blastn 109866 534 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
4814047 4814047 PRJEB2368_P_NODE_12244_length_214_cov_2.649718_g11925_i0 PRJEB2368 12244 214 2.649718 5.67039652 Alphainfluenzavirus 197911 Viruses Viruses 396 7.559999999999996e-106   NTclustered gi|1605170371|gb|MK731776.1| 11320 g11925 i0 100 100 214 0 100 0 1 214 793 580 Influenza A virus (A/New York/WC-LVD-12-040/2012(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds blastn 21400 396 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
4814208 4814208 PRJEB2368_P_NODE_84_length_2374_cov_54.372700_g56_i0 PRJEB2368 84 2374 54.3727 1290.807898 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1413 0   NTclustered gi|51340768|gb|AY687392.1| RQ01 g56 i0 78.428 38.4347093513058 2188 458 92 13 139 2319 2185 5 Influenza B virus (B/Beijing/76/98) polymerase (PA) gene, complete cds blastn 91244 1415 0.998586572438163 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
6089321 6089321 PRJEB2368_P_NODE_11865_length_236_cov_1.175879_g11546_i0 PRJEB2368 11865 236 1.175879 2.77507444 Alphainfluenzavirus 197911 Viruses Viruses 436 4.999999999999999e-118   NTclustered gi|2624562240|gb|OR874268.1| 11320 g11546 i0 100 100 236 0 100 0 1 236 519 754 Influenza A virus (A/Kenya/CDC-Nakuru/094/2009(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 23600 436 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
6089431 6089431 PRJEB2368_P_NODE_3565_length_426_cov_2.010283_g3257_i0 PRJEB2368 3565 426 2.010283 8.56380558 Alphainfluenzavirus 197911 Viruses Viruses 689 0   NTclustered gi|237640013|gb|CY040028.1| 644645 g3257 i0 94.749 102.816901408451 438 11 100 1 1 426 966 529 Influenza A virus (A/New York/3049/2009(H1N1)) segment 3, complete sequence blastn 43800 695 0.99136690647482 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
8639462 8639462 PRJEB2368_P_NODE_5287_length_334_cov_2.265993_g4969_i0 PRJEB2368 5287 334 2.265993 7.56841662 Alphainfluenzavirus 197911 Viruses Viruses 385 2.73e-102   NTclustered gi|2810150290|gb|PQ384650.1| 11320 g4969 i0 100 69.065868263473 208 0 79 0 127 334 2164 1957 Influenza A virus (A/mus musculus/Ohio/H1N1_Parent_PB1_consensus/2023(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 23068 385 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
9914418 9914418 PRJEB2368_P_NODE_13708_length_175_cov_1.695652_g13389_i0 PRJEB2368 13708 175 1.695652 2.967391 Alphainfluenzavirus 197911 Viruses Viruses 324 2.83e-84   NTclustered gi|2740074559|gb|PP874780.1| 11320 g13389 i0 100 100 175 0 100 0 1 175 667 493 Influenza A virus (A/Colombia/M6406/2016(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 17500 324 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
14051032 14051032 PRJEB2368_P_NODE_3952_length_400_cov_3.165289_g3641_i0 PRJEB2368 3952 400 3.165289 12.661156 Zebrafish influenza B-like virus RQ01 Viruses Viruses 555 2.399999999999999e-153   NTclustered gi|241996387|gb|GQ324576.1| RQ01 g3641 i0 100 82.6725 300 0 82 0 1 300 407 108 Influenza A virus (A/Tokushima/1/2009(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 33069 555 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Zebrafish influenza B-like virus
18838188 18838188 PRJEB2368_P_NODE_5635_length_322_cov_4.982456_g5317_i0 PRJEB2368 5635 322 4.982456 16.04350832 Alphainfluenzavirus 197911 Viruses Viruses 370 7.35e-98   NTclustered gi|1920167247|gb|MW185783.1| 11320 g5317 i0 100 72.1552795031056 200 0 72 0 18 217 2111 1912 Influenza A virus (A/Lithuania/1167/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 23234 370 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
20112901 20112901 PRJEB2368_P_NODE_4316_length_378_cov_3.252199_g4003_i0 PRJEB2368 4316 378 3.252199 12.29331222 Alphainfluenzavirus 197911 Viruses Viruses 387 8.69e-103   NTclustered gi|1516264074|gb|MK080186.1| 11320 g4003 i0 99.528 64.3439153439153 212 1 64 0 167 378 1212 1001 Influenza A virus (A/Kerala/RGCB_A808/2009(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 24322 387 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
20112911 20112911 PRJEB2368_P_NODE_5376_length_331_cov_2.081633_g5058_i0 PRJEB2368 5376 331 2.081633 6.89020523 Alphainfluenzavirus 197911 Viruses Viruses 257 6.150000000000001e-64   NTclustered gi|2126649986|gb|OL311403.1| 11320 g5058 i0 100 53.0664652567976 139 0 42 0 193 331 227 365 Influenza A virus (A/swine/Liaoning/FS1084/2020(H1N1)) segment 3 polymerase PA (PA) and PA-X protein (PA-X) genes, complete cds blastn 17565 257 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
21388346 21388346 PRJEB2368_P_NODE_12117_length_221_cov_1.396739_g11798_i0 PRJEB2368 12117 221 1.396739 3.08679319 Alphainfluenzavirus 197911 Viruses Viruses 409 1.0100000000000001e-109   NTclustered gi|2624562240|gb|OR874268.1| 11320 g11798 i0 100 100 221 0 100 0 1 221 227 447 Influenza A virus (A/Kenya/CDC-Nakuru/094/2009(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 22100 409 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
21699619 21699619 PRJEB2368_P_NODE_14918_length_159_cov_1.598361_g14599_i0 PRJEB2368 14918 159 1.598361 2.54139399 Zebrafish influenza B-like virus RQ01 Viruses Viruses 243 7.279999999999999e-60   NTclustered gi|323668939|gb|CY083915.1| RQ01 g14599 i0 97.872 99.3081761006289 141 1 100 1 21 159 196 56 Influenza A virus (A/Aalborg/INS132/2009(H1N1)) polymerase PA (PA) gene, complete cds blastn 15790 243 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Zebrafish influenza B-like virus
21699646 21699646 PRJEB2368_P_NODE_78_length_2413_cov_23.010943_g52_i0 PRJEB2368 78 2413 23.010943 555.25405459 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1646 0   NTclustered gi|2278964023|dbj|LC720276.1| RQ01 g52 i0 79.179 98.9245752175715 2387 487 99 9 10 2392 1 2381 Influenza B virus B/Fukushima/H169/2018 viral cRNA, segment 1, nearly complete sequence blastn 238705 1646 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
22663152 22663152 PRJEB2368_P_NODE_1058_length_843_cov_4.173697_g857_i0 PRJEB2368 1058 843 4.173697 35.18426571 Alphainfluenzavirus 197911 Viruses Viruses 1057 0   NTclustered gi|2658357302|gb|PP198194.1| 11320 g857 i0 99.826 82.4780545670225 575 1 76 0 109 683 204 778 Influenza A virus (A/swine/Colombia/M7131/2016(H1N1)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds blastn 69529 1057 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
22663295 22663295 PRJEB2368_P_NODE_3458_length_435_cov_1.288945_g3151_i0 PRJEB2368 3458 435 1.288945 5.60691075 Alphainfluenzavirus 197911 Viruses Viruses 436 9.93e-118   NTclustered gi|1917182570|gb|MW127286.1| 11320 g3151 i0 100 97.7011494252874 236 0 98 0 200 435 1481 1246 Influenza A virus (A/Thailand/CU-B5356/2011(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 42500 436 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
22974876 22974876 PRJEB2368_P_NODE_159_length_1879_cov_149.901737_g111_i0 PRJEB2368 159 1879 149.901737 2816.65363823 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1040 0   NTclustered gi|2716140925|gb|PP640154.1| RQ01 g111 i0 78.752 83.578499201703 1586 314 84 22 39 1616 1815 245 Influenza B virus (B/Arkansas/03/2024) segment 5 nucleoprotein (NP) gene, complete cds blastn 157044 1040 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
23938606 23938606 PRJEB2368_P_NODE_13399_length_180_cov_2.160839_g13080_i0 PRJEB2368 13399 180 2.160839 3.8895102 Alphainfluenzavirus 197911 Viruses Viruses 333 4.87e-87   NTclustered gi|1360457686|gb|MH061670.1| 11320 g13080 i0 100 100 180 0 100 0 1 180 1273 1094 Influenza A virus (A/swine/Mexico/9425974/2012(H1N1)) segment 3 polymerase PA (PA) and PA-X protein (PA-X) genes, complete cds blastn 18000 333 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
25212458 25212458 PRJEB2368_P_NODE_4900_length_349_cov_2.429487_g4583_i0 PRJEB2368 4900 349 2.429487 8.47890963 Alphainfluenzavirus 197911 Viruses Viruses 313 1.37e-80   NTclustered gi|294611570|gb|CY060862.1| 742223 g4583 i0 100 56.269340974212 169 0 59 0 181 349 219 387 Influenza A virus (A/Texas/JMS359/2009(H1N1)) segment 5, complete sequence blastn 19638 313 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
25212469 25212469 PRJEB2368_P_NODE_5860_length_316_cov_2.003584_g5542_i0 PRJEB2368 5860 316 2.003584 6.33132544 Alphainfluenzavirus 197911 Viruses Viruses 311 4.42e-80   NTclustered gi|1605169783|gb|MK731528.1| 11320 g5542 i0 100 65.5854430379747 168 0 68 0 1 168 1177 1344 Influenza A virus (A/New York/WC-LVD-11-019/2011(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds blastn 20725 311 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
27823076 27823076 PRJEB2368_P_NODE_284_length_1571_cov_81.546284_g203_i0 PRJEB2368 284 1571 81.546284 1281.09212164 Zebrafish influenza B-like virus RQ01 Viruses Viruses 553 1.2600000000000002e-192   NR 7XVR_A RQ01 g203 i0 67.9 1.48949713558243 392 126 74.9 0 304 1479 13 404 7XVR_A Chain A, Neuraminidase [Wuhan spiny eel influenza virus] diamond 2340 553 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza B-like virus
29401598 29401598 PRJEB2368_P_NODE_169_length_1842_cov_161.344044_g121_i0 PRJEB2368 169 1842 161.344044 2971.95729048 Zebrafish influenza B-like virus RQ01 Viruses Viruses 699 3.7e-246   NR AVM87624.1 RQ01 g121 i0 62.2 0.913680781758958 561 208 91.2 3 1798 119 11 568 AVM87624.1 hemagglutinin, partial [Wuhan spiny eel influenza virus] diamond 1683 699 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza B-like virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;