RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB2368", tax_clade = "Candidatus Pacearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 1 ✖

bioproject 1

  • PRJEB2368 · 1 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28542893 28542893 PRJEB2368_P_NODE_7207_length_287_cov_2.384000_g6889_i0 PRJEB2368 7207 287 2.384 6.84208 Archaea 2157 Archaea Archaea 47 0.00208   NR PIN94733.1 1974437 g6889 i0 30.5 4.93379790940767 95 47 99.3 1 287 3 451 526 PIN94733.1 MAG: DNA polymerase II large subunit, partial [Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_30_48] diamond 1416 47 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_30_48

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;