RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB2368", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB2368 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27349488 27349488 PRJEB2368_P_NODE_10703_length_286_cov_2.112450_g10385_i0 PRJEB2368 10703 286 2.11245 6.041607 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 50.8 4.37e-5   NR MCF7843886.1 2044595 g10385 i0 96 0.262237762237762 25 1 26.2 0 1 75 120 144 MCF7843886.1 ERF family protein [Candidatus Altimarinota bacterium] diamond 75 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28485977 28485977 PRJEB2368_P_NODE_10147_length_287_cov_1.296000_g9829_i0 PRJEB2368 10147 287 1.296 3.71952 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 50.1 1.14e-4   NR MBX9808812.1 2044595 g9829 i0 95.8 0.752613240418119 24 1 25.1 0 3 74 188 211 MBX9808812.1 response regulator transcription factor [Candidatus Altimarinota bacterium] diamond 216 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;