RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB2333" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2333 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29111111 29111111 PRJEB2333_P_NODE_3188_length_419_cov_1.238220_g2413_i0 PRJEB2333 3188 419 1.23822 5.1881418 Eukaryota 2759 Fungi Fungi 69.7 1.72e-11   NR KAI9469279.1 4864 g2413 i0 82.9 8.52028639618139 35 6 25.1 0 419 315 116 150 KAI9469279.1 ribosomal protein L15e [Coemansia mojavensis] diamond 3570 70.1 0.994293865905849 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia mojavensis
29995295 29995295 PRJEB2333_P_NODE_3351_length_399_cov_1.071823_g2575_i0 PRJEB2333 3351 399 1.071823 4.27657377 Harpellales 61421 Fungi Fungi 45.4 0.00914   NR PVU93251.1 61424 g2575 i0 87 0.518796992481203 23 3 17.3 0 382 314 1 23 PVU93251.1 hypothetical protein BB559_003379 [Furculomyces boomerangus] diamond 207 45.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Furculomyces Furculomyces boomerangus
32776458 32776458 PRJEB2333_P_NODE_3000_length_445_cov_1.531863_g2226_i0 PRJEB2333 3000 445 1.531863 6.81679035 Eukaryota 2759 Fungi Fungi 103 2.63e-25   NR KAJ1678875.1 68401 g2226 i0 72.9 5.88539325842697 59 16 39.8 0 267 443 59 117 KAJ1678875.1 60S ribosomal protein L23 [Spiromyces aspiralis] diamond 2619 104 0.990384615384615 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;