RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB2333" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2333 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28732141 28732141 PRJEB2333_P_NODE_3947_length_191_cov_1.519481_g3170_i0 PRJEB2333 3947 191 1.519481 2.90220871 Diversisporales 214509 Fungi Fungi 108 1.9e-27   NR CAG8523491.1 60492 g3170 i0 76.2 5.93717277486911 63 15 99 0 3 191 127 189 CAG8523491.1 17401_t:CDS:2 [Racocetra fulgida] diamond 1134 109 0.990825688073395 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra fulgida
28770039 28770039 PRJEB2333_P_NODE_4047_length_184_cov_1.455782_g3270_i0 PRJEB2333 4047 184 1.455782 2.67863888 Halteromyces radiatus 101107 Fungi Fungi 91.7 7.16e-21   NR XP_051398182.1 101107 g3270 i0 53.3 2.93478260869565 60 28 97.8 0 182 3 58 117 XP_051398182.1 WD40-repeat-containing domain protein [Halteromyces radiatus] diamond 540 91.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
30791459 30791459 PRJEB2333_P_NODE_4454_length_163_cov_2.785714_g3677_i0 PRJEB2333 4454 163 2.785714 4.54071382 Acaulospora morrowiae 94023 Fungi Fungi 46.2 3.67e-4   NR CAG8540721.1 94023 g3677 i0 52 3.47852760736196 50 24 92 0 163 14 96 145 CAG8540721.1 7834_t:CDS:2 [Acaulospora morrowiae] diamond 567 46.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Acaulosporaceae Acaulospora Acaulospora morrowiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;