RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB2333" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB2333 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24248690 24248690 PRJEB2333_P_NODE_1340_length_1769_cov_2.827945_g801_i0 PRJEB2333 1340 1769 2.827945 50.02634705 Pygsuia 1401266 SAR_Eukaryotes SAR_Eukaryotes 430 1.6e-142   NR MES1909605.1 1215613 g801 i0 47.4 26.7693612210288 506 139 85 6 2 1504 54 437 MES1909605.1 hypothetical protein [Cercozoa sp. M6MM] diamond 47355 430 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30349686 30349686 PRJEB2333_P_NODE_2572_length_556_cov_2.377649_g1803_i0 PRJEB2333 2572 556 2.377649 13.21972844 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 226 4.88e-71   NR ADK26624.1 323453 g1803 i0 60.9 0.992805755395683 184 72 99.3 0 554 3 89 272 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 552 226 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;