contig_metadata
27 rows where bioproject = "PRJEB2333" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22864 | 22864 | PRJEB2333_P_NODE_3301_length_404_cov_2.754768_g2525_i0 | PRJEB2333 | 3301 | 404 | 2.754768 | 11.12926272 | Sanguibacter biliveldensis | 3030830 | Bacteria | Bacteria | 525 | 1.8999999999999994e-144 | NTclustered | gi|2621750761|gb|CP138359.1| | 3030830 | g2525 | i0 | 91.601 | 306.44801980198 | 381 | 31 | 98 | 1 | 24 | 404 | 794920 | 794541 | Sanguibacter biliveldensis strain 4.1 chromosome, complete genome | blastn | 123805 | 525 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Sanguibacteraceae | Sanguibacter | Sanguibacter biliveldensis | ||
| 2261424 | 2261424 | PRJEB2333_P_NODE_2442_length_623_cov_2.129693_g1678_i1 | PRJEB2333 | 2442 | 623 | 2.129693 | 13.26798739 | Micrococcus | 1269 | Bacteria | Bacteria | 606 | 1.0499999999999997e-168 | NTclustered | gi|1949953231|gb|CP066288.1| | 1270 | g1678 | i1 | 96.237 | 143.337078651685 | 372 | 11 | 80 | 2 | 1 | 369 | 2260414 | 2260785 | Micrococcus luteus strain FDAARGOS_1034 chromosome | blastn | 89299 | 606 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 4813964 | 4813964 | PRJEB2333_P_NODE_2904_length_460_cov_2.900709_g2132_i0 | PRJEB2333 | 2904 | 460 | 2.900709 | 13.3432614 | Bacillati | 1783272 | Bacteria | Bacteria | 337 | 1.1e-87 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g2132 | i0 | 100 | 366.980434782609 | 182 | 0 | 73 | 0 | 279 | 460 | 748736 | 748917 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 168811 | 337 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 6089282 | 6089282 | PRJEB2333_P_NODE_4665_length_156_cov_3.016807_g3888_i0 | PRJEB2333 | 4665 | 156 | 3.016807 | 4.70621892 | Actinomyces | 1654 | Bacteria | Bacteria | 226 | 7.149999999999997e-55 | NTclustered | gi|1948661326|gb|CP066049.1| | 1655 | g3888 | i0 | 93.96 | 225.525641025641 | 149 | 9 | 96 | 0 | 3 | 151 | 295683 | 295831 | Actinomyces naeslundii strain FDAARGOS_1037 chromosome, complete genome | blastn | 35182 | 228 | 0.991228070175439 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 7363893 | 7363893 | PRJEB2333_P_NODE_4606_length_158_cov_2.198347_g3829_i0 | PRJEB2333 | 4606 | 158 | 2.198347 | 3.47338826 | root | 1 | Root_unresolved | Root_unresolved | 292 | 7.07e-75 | NTclustered | gi|1226527082|gb|MF578812.1| | 1655 | g3829 | i0 | 100 | 100 | 158 | 0 | 100 | 0 | 1 | 158 | 325 | 482 | Actinomyces naeslundii strain K55 16S ribosomal RNA gene, partial sequence | blastn | 15800 | 292 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 8639258 | 8639258 | PRJEB2333_P_NODE_3347_length_399_cov_1.848066_g2571_i0 | PRJEB2333 | 3347 | 399 | 1.848066 | 7.37378334 | Micrococcaceae | 1268 | Bacteria | Bacteria | 248 | 4.54e-61 | NTclustered | gi|1906898532|gb|CP059853.1| | 37929 | g2571 | i0 | 96.078 | 196.428571428571 | 153 | 4 | 70 | 1 | 1 | 153 | 562058 | 562208 | Glutamicibacter nicotianae strain ZM05 chromosome, complete genome | blastn | 78375 | 248 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Glutamicibacter | Glutamicibacter nicotianae | ||
| 8639262 | 8639262 | PRJEB2333_P_NODE_3687_length_219_cov_11.181319_g2910_i0 | PRJEB2333 | 3687 | 219 | 11.181319 | 24.48708861 | Streptococcus | 1301 | Bacteria | Bacteria | 405 | 1.29e-108 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g2910 | i0 | 100 | 106 | 219 | 0 | 100 | 0 | 1 | 219 | 1573074 | 1572856 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 23214 | 405 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 8639264 | 8639264 | PRJEB2333_P_NODE_3847_length_199_cov_3.228395_g3070_i0 | PRJEB2333 | 3847 | 199 | 3.228395 | 6.42450605 | Planococcus | 1372 | Bacteria | Bacteria | 340 | 3.2899999999999996e-89 | NTclustered | gi|1799096099|gb|CP047673.1| | 2233542 | g3070 | i0 | 97.487 | 534 | 199 | 5 | 100 | 0 | 1 | 199 | 139701 | 139503 | Planococcus halotolerans strain Y50 chromosome, complete genome | blastn | 106266 | 340 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Planococcus | Planococcus halotolerans | ||
| 11189486 | 11189486 | PRJEB2333_P_NODE_2769_length_489_cov_1.584071_g1998_i0 | PRJEB2333 | 2769 | 489 | 1.584071 | 7.74610719 | Corynebacterium | 1716 | Bacteria | Bacteria | 318 | 4.259999999999999e-82 | NTclustered | gi|2869797333|gb|CP175765.1| | 38304 | g1998 | i0 | 100 | 250.298568507157 | 172 | 0 | 68 | 0 | 318 | 489 | 2720 | 2891 | Corynebacterium tuberculostearicum strain YSMAA5_1_F11 chromosome, complete genome | blastn | 122396 | 318 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 12776456 | 12776456 | PRJEB2333_P_NODE_4331_length_168_cov_1.137405_g3554_i0 | PRJEB2333 | 4331 | 168 | 1.137405 | 1.9108404 | Synechococcus sp. CB0101 | 232348 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|1626690261|gb|CP039373.1| | 232348 | g3554 | i0 | 100 | 0.166666666666667 | 28 | 0 | 17 | 0 | 98 | 125 | 1687046 | 1687073 | Synechococcus sp. CB0101 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. CB0101 | |
| 13739606 | 13739606 | PRJEB2333_P_NODE_3451_length_340_cov_6.217822_g2674_i0 | PRJEB2333 | 3451 | 340 | 6.217822 | 21.1405948 | Streptococcus | 1301 | Bacteria | Bacteria | 623 | 5.429999999999999e-174 | NTclustered | gi|2182940279|gb|OM368578.1| | 1313 | g2674 | i0 | 99.706 | 147.202941176471 | 340 | 1 | 100 | 0 | 1 | 340 | 349 | 10 | Streptococcus pneumoniae strain FC6532 16S ribosomal RNA gene, partial sequence | blastn | 50049 | 628 | 0.99203821656051006 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 15014024 | 15014024 | PRJEB2333_P_NODE_3392_length_393_cov_1.522472_g2616_i0 | PRJEB2333 | 3392 | 393 | 1.522472 | 5.98331496 | root | 1 | Root_unresolved | Root_unresolved | 169 | 3.5799999999999997e-37 | NTclustered | gi|225696244|gb|FJ805911.1| | 1211 | g2616 | i0 | 100 | 40.3740458015267 | 91 | 0 | 43 | 0 | 1 | 91 | 2188 | 2098 | Uncultured cyanobacterium clone AN2_2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 15867 | 169 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | uncultured cyanobacterium | |||||
| 16288860 | 16288860 | PRJEB2333_P_NODE_3633_length_228_cov_2.251309_g2856_i0 | PRJEB2333 | 3633 | 228 | 2.251309 | 5.13298452 | Nocardioides | 1839 | Bacteria | Bacteria | 392 | 1.0499999999999997e-104 | NTclustered | gi|1321370352|gb|CP025581.1| | 2045452 | g2856 | i0 | 97.807 | 255.486842105263 | 228 | 4 | 100 | 1 | 1 | 228 | 999333 | 999107 | Nocardioides houyundeii strain 78 chromosome, complete genome | blastn | 58251 | 392 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides houyundeii | ||
| 17564017 | 17564017 | PRJEB2333_P_NODE_2834_length_473_cov_4.784404_g2062_i0 | PRJEB2333 | 2834 | 473 | 4.784404 | 22.63023092 | Streptococcus | 1301 | Bacteria | Bacteria | 863 | 0 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g2062 | i0 | 99.577 | 345.07822410148 | 473 | 2 | 100 | 0 | 1 | 473 | 1571585 | 1571113 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 163222 | 863 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 17564022 | 17564022 | PRJEB2333_P_NODE_3334_length_400_cov_2.476584_g2558_i0 | PRJEB2333 | 3334 | 400 | 2.476584 | 9.906336 | Micrococcus | 1269 | Bacteria | Bacteria | 233 | 1.2799999999999998e-56 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g2558 | i0 | 98.485 | 133.8675 | 132 | 2 | 33 | 0 | 2 | 133 | 345471 | 345602 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 53547 | 233 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 17564031 | 17564031 | PRJEB2333_P_NODE_4094_length_180_cov_5.706294_g3317_i0 | PRJEB2333 | 4094 | 180 | 5.706294 | 10.2713292 | Rothia | 32207 | Bacteria | Bacteria | 333 | 4.87e-87 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g3317 | i0 | 100 | 313.716666666667 | 180 | 0 | 100 | 0 | 1 | 180 | 651955 | 651776 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 56469 | 333 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 18837958 | 18837958 | PRJEB2333_P_NODE_3695_length_218_cov_5.552486_g2918_i0 | PRJEB2333 | 3695 | 218 | 5.552486 | 12.10441948 | Bacillales | 1385 | Bacteria | Bacteria | 403 | 4.62e-108 | NTclustered | gi|2556673542|gb|OR367734.1| | 1282 | g2918 | i0 | 100 | 110.009174311927 | 218 | 0 | 100 | 0 | 1 | 218 | 298 | 515 | Staphylococcus epidermidis strain A3 16S ribosomal RNA gene, partial sequence | blastn | 23982 | 403 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20112669 | 20112669 | PRJEB2333_P_NODE_2336_length_687_cov_4.549231_g1581_i0 | PRJEB2333 | 2336 | 687 | 4.549231 | 31.25321697 | Streptococcus | 1301 | Bacteria | Bacteria | 1232 | 0 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g1581 | i0 | 98.984 | 366.193595342067 | 689 | 5 | 100 | 2 | 1 | 687 | 1570541 | 1569853 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 251575 | 1238 | 0.995153473344103 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 20112697 | 20112697 | PRJEB2333_P_NODE_3856_length_198_cov_6.608696_g3079_i0 | PRJEB2333 | 3856 | 198 | 6.608696 | 13.08521808 | Micrococcaceae | 1268 | Bacteria | Bacteria | 366 | 5.4e-97 | NTclustered | gi|1906898532|gb|CP059853.1| | 37929 | g3079 | i0 | 100 | 408.752525252525 | 198 | 0 | 100 | 0 | 1 | 198 | 100856 | 100659 | Glutamicibacter nicotianae strain ZM05 chromosome, complete genome | blastn | 80933 | 366 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Glutamicibacter | Glutamicibacter nicotianae | ||
| 20112705 | 20112705 | PRJEB2333_P_NODE_4096_length_180_cov_2.916084_g3319_i0 | PRJEB2333 | 4096 | 180 | 2.916084 | 5.2489512 | Staphylococcus | 1279 | Bacteria | Bacteria | 333 | 4.87e-87 | NTclustered | gi|1487186653|gb|MF678869.1| | 29380 | g3319 | i0 | 100 | 470.022222222222 | 180 | 0 | 100 | 0 | 1 | 180 | 2395 | 2574 | Staphylococcus caprae strain DSM 20608 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 84604 | 333 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus caprae | ||
| 21699594 | 21699594 | PRJEB2333_P_NODE_4178_length_175_cov_2.420290_g3401_i0 | PRJEB2333 | 4178 | 175 | 2.42029 | 4.2355075 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 274 | 2.89e-69 | NTclustered | gi|2694275225|gb|CP140010.1| | 1528099 | g3401 | i0 | 94.857 | 255.634285714286 | 175 | 9 | 100 | 0 | 1 | 175 | 1854078 | 1854252 | MAG: Lawsonella clevelandensis isolate TECA_312545_bc_10 chromosome | blastn | 44736 | 274 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 23938479 | 23938479 | PRJEB2333_P_NODE_2339_length_686_cov_3.027735_g1583_i0 | PRJEB2333 | 2339 | 686 | 3.027735 | 20.7702621 | Rothia | 32207 | Bacteria | Bacteria | 619 | 1.4999999999999996e-172 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g1583 | i0 | 94.541 | 309.316326530612 | 403 | 18 | 92 | 4 | 287 | 686 | 1004404 | 1004003 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 212191 | 619 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 23938526 | 23938526 | PRJEB2333_P_NODE_4819_length_152_cov_1.626087_g4042_i0 | PRJEB2333 | 4819 | 152 | 1.626087 | 2.47165224 | Geobacillus | 129337 | Bacteria | Bacteria | 281 | 1.46e-71 | NTclustered | gi|1205983|gb|U33536.1|BSU33536 | 1422 | g4042 | i0 | 100 | 10 | 152 | 0 | 100 | 0 | 1 | 152 | 1508 | 1659 | Bacillus stearothermophilus DNA polymerase I (polA) gene, complete cds | blastn | 1520 | 281 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus stearothermophilus | ||
| 25212230 | 25212230 | PRJEB2333_P_NODE_2440_length_623_cov_2.378840_g1678_i0 | PRJEB2333 | 2440 | 623 | 2.37884 | 14.8201732 | Micrococcus | 1269 | Bacteria | Bacteria | 597 | 6.329999999999999e-166 | NTclustered | gi|1949953231|gb|CP066288.1| | 1270 | g1678 | i0 | 96.185 | 143.199036918138 | 367 | 11 | 79 | 2 | 260 | 623 | 2260780 | 2260414 | Micrococcus luteus strain FDAARGOS_1034 chromosome | blastn | 89213 | 597 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 25212236 | 25212236 | PRJEB2333_P_NODE_2680_length_513_cov_1.861345_g1910_i0 | PRJEB2333 | 2680 | 513 | 1.861345 | 9.54869985 | Mycobacteriales | 85007 | Bacteria | Bacteria | 390 | 9.37e-104 | NTclustered | gi|2663843834|gb|CP143053.1| | 321318 | g1910 | i0 | 95.528 | 137.884990253411 | 246 | 8 | 47 | 2 | 271 | 513 | 853464 | 853709 | Dietzia cinnamea strain 55 chromosome | blastn | 70735 | 390 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia cinnamea | ||
| 25212248 | 25212248 | PRJEB2333_P_NODE_3300_length_404_cov_3.160763_g2524_i0 | PRJEB2333 | 3300 | 404 | 3.160763 | 12.76948252 | Rothia | 32207 | Bacteria | Bacteria | 640 | 6.5e-179 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g2524 | i0 | 95.297 | 278.299504950495 | 404 | 17 | 99 | 2 | 1 | 403 | 651955 | 651553 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 112433 | 645 | 0.992248062015504 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 25212253 | 25212253 | PRJEB2333_P_NODE_3580_length_240_cov_2.871921_g2803_i0 | PRJEB2333 | 3580 | 240 | 2.871921 | 6.8926104 | Micrococcus | 1269 | Bacteria | Bacteria | 394 | 3.11e-105 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g2803 | i0 | 96.25 | 260.1125 | 240 | 9 | 100 | 0 | 1 | 240 | 346591 | 346352 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 62427 | 394 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;