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contig_metadata

21 rows where bioproject = "PRJEB2333" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJEB2333 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7363876 7363876 PRJEB2333_P_NODE_3846_length_199_cov_3.709877_g3069_i0 PRJEB2333 3846 199 3.709877 7.38265523 Leptopharynx 502089 SAR_Eukaryotes SAR_Eukaryotes 363 7.019999999999998e-96   NTclustered gi|2125425273|gb|OK663150.1| 187299 g3069 i0 99.497 96.2763819095477 199 1 100 0 1 199 575 377 Uncultured ciliate isolate DGGE gel band clone C81 small subunit ribosomal RNA gene, partial sequence blastn 19159 363 1 Eukaryota Sar   Ciliophora         uncultured ciliate
8949880 8949880 PRJEB2333_P_NODE_2908_length_460_cov_1.997636_g2136_i0 PRJEB2333 2908 460 1.997636 9.1891256 Nannochloropsis salina CCMP1776 1027361 SAR_Eukaryotes SAR_Eukaryotes 160 6.22e-47   NR TFJ85726.1 1027361 g2136 i0 55.2 1.92391304347826 145 60 91.3 1 436 17 7 151 TFJ85726.1 hypothetical protein NSK_003230 [Nannochloropsis salina CCMP1776] diamond 885 160 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Microchloropsis Microchloropsis salina
9914316 9914316 PRJEB2333_P_NODE_3648_length_226_cov_3.365079_g2871_i0 PRJEB2333 3648 226 3.365079 7.60507854 root 1 Root_unresolved Root_unresolved 102 1.97e-17   NTclustered gi|219903754|emb|FM955257.1| 2996 g2871 i0 90.909 34.216814159292 77 6 34 1 55 130 1774 1850 Hydrurus foetidus partial 28S rRNA gene blastn 7733 102 1 Eukaryota Sar     Chrysophyceae Hydrurales Hydruraceae Hydrurus Hydrurus foetidus
10225637 10225637 PRJEB2333_P_NODE_3149_length_424_cov_1.873385_g2374_i0 PRJEB2333 3149 424 1.873385 7.9431524 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 198 5.38e-62   NR XP_026191109.1 88456 g2374 i0 74.4 59.2712264150943 133 34 94.1 0 3 401 61 193 XP_026191109.1 40S ribosomal protein S5 [Cyclospora cayetanensis] diamond 25131 198 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
10225638 10225638 PRJEB2333_P_NODE_3469_length_313_cov_2.119565_g2692_i0 PRJEB2333 3469 313 2.119565 6.63423845 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 137 2.42e-38   NR CEO98457.1 37360 g2692 i0 64.4 0.996805111821086 104 37 99.7 0 313 2 43 146 CEO98457.1 hypothetical protein PBRA_006571 [Plasmodiophora brassicae] diamond 312 137 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
15014037 15014037 PRJEB2333_P_NODE_4132_length_178_cov_1.503546_g3355_i0 PRJEB2333 4132 178 1.503546 2.67631188 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 117 5.26e-22   NTclustered gi|166042668|emb|CU350907.1| 100861 g3355 i0 78.977 97.1685393258427 176 33 98 3 5 178 621 794 Aphanomyces euteiches cDNA blastn 17296 117 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
15325037 15325037 PRJEB2333_P_NODE_3893_length_195_cov_2.626582_g3116_i0 PRJEB2333 3893 195 2.626582 5.1218349 Schizochytrium aggregatum 4773 SAR_Eukaryotes SAR_Eukaryotes 154 4.49e-33   NTclustered gi|85822990|gb|DQ356661.1| 4773 g3116 i0 81.25 87.3384615384615 192 34 98 2 5 195 632 822 Schizochytrium aggregatum actin gene, partial cds blastn 17031 154 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Schizochytrium Schizochytrium aggregatum
17564021 17564021 PRJEB2333_P_NODE_3314_length_403_cov_0.825137_g2538_i0 PRJEB2333 3314 403 0.825137 3.32530211 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 147 1.72e-30   NTclustered gi|16326556|gb|AF409124.1| 2829 g2538 i0 96.591 38.0967741935484 88 3 39 0 316 403 3431 3518 Heterosigma akashiwo internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 15353 147 1 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
20112712 20112712 PRJEB2333_P_NODE_4436_length_164_cov_1.724409_g3659_i0 PRJEB2333 4436 164 1.724409 2.82803076 Leptopharynx 502089 SAR_Eukaryotes SAR_Eukaryotes 298 1.59e-76   NTclustered gi|318083432|gb|HQ668467.1| 502090 g3659 i0 99.39 93.140243902439 164 1 100 0 1 164 1614 1451 Leptopharynx costatus 18S ribosomal RNA gene, partial sequence; macronuclear blastn 15275 298 1 Eukaryota Sar   Ciliophora Nassophorea Microthoracida Microthoracidae Leptopharynx Leptopharynx costatus
24248690 24248690 PRJEB2333_P_NODE_1340_length_1769_cov_2.827945_g801_i0 PRJEB2333 1340 1769 2.827945 50.02634705 Pygsuia 1401266 SAR_Eukaryotes SAR_Eukaryotes 430 1.6e-142   NR MES1909605.1 1215613 g801 i0 47.4 26.7693612210288 506 139 85 6 2 1504 54 437 MES1909605.1 hypothetical protein [Cercozoa sp. M6MM] diamond 47355 430 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
25212282 25212282 PRJEB2333_P_NODE_4860_length_151_cov_1.578947_g4083_i0 PRJEB2333 4860 151 1.578947 2.38420997 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 279 5.19e-71   NTclustered gi|111035921|emb|AJ781306.1| 5908 g4083 i0 100 84.9470198675497 151 0 100 0 1 151 465 315 Tetrahymena pyriformis partial 23S rRNA gene, strain CCAP 1630/1W blastn 12827 279 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
27121232 27121232 PRJEB2333_P_NODE_2502_length_589_cov_1.336957_g1735_i0 PRJEB2333 2502 589 1.336957 7.87467673 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 94 1.62e-19   NR KAJ8578052.1 4785 g1735 i0 42.2 5.25127334465195 116 64 59.1 2 588 241 133 245 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 3093 94.7 0.992608236536431 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27633569 27633569 PRJEB2333_P_NODE_4724_length_155_cov_0.991525_g3947_i0 PRJEB2333 4724 155 0.991525 1.53686375 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 40.8 0.0316   NR CEO99081.1 37360 g3947 i0 60.6 0.638709677419355 33 13 63.9 0 15 113 109 141 CEO99081.1 hypothetical protein PBRA_007195 [Plasmodiophora brassicae] diamond 99 40.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28454577 28454577 PRJEB2333_P_NODE_3906_length_194_cov_1.719745_g3129_i0 PRJEB2333 3906 194 1.719745 3.3363053 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 70.9 2.38e-12   NR DAZ96502.1 4803 g3129 i0 54 2.92268041237113 63 29 97.4 0 192 4 2045 2107 DAZ96502.1 TPA: hypothetical protein N0F65_008053 [Lagenidium giganteum] diamond 567 70.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28984985 28984985 PRJEB2333_P_NODE_2428_length_629_cov_1.658784_g1666_i0 PRJEB2333 2428 629 1.658784 10.43375136 Blastocystis 12967 SAR_Eukaryotes SAR_Eukaryotes 73.6 6.18e-12   NR KAK8817403.1 478820 g1666 i0 59 1.75039745627981 61 25 29.1 0 6 188 84 144 KAK8817403.1 hypothetical protein WA556_003296 [Blastocystis sp. ATCC 50177/Nand II] diamond 1101 73.6 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
29653810 29653810 PRJEB2333_P_NODE_4590_length_159_cov_0.959016_g3813_i0 PRJEB2333 4590 159 0.959016 1.52483544 Cryptosporidium andersoni 117008 SAR_Eukaryotes SAR_Eukaryotes 70.1 5.32e-13   NR XP_067069864.1 117008 g3813 i0 64.2 2 53 19 100 0 159 1 19 71 XP_067069864.1 60s ribosomal protein L13A [Cryptosporidium andersoni] diamond 318 70.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
30349686 30349686 PRJEB2333_P_NODE_2572_length_556_cov_2.377649_g1803_i0 PRJEB2333 2572 556 2.377649 13.21972844 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 226 4.88e-71   NR ADK26624.1 323453 g1803 i0 60.9 0.992805755395683 184 72 99.3 0 554 3 89 272 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 552 226 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
30437754 30437754 PRJEB2333_P_NODE_2513_length_583_cov_1.879121_g1746_i0 PRJEB2333 2513 583 1.879121 10.95527543 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 202 1.15e-62   NR KAG1694345.1 4784 g1746 i0 53.6 3.99313893653516 194 64 99.8 1 583 2 28 195 KAG1694345.1 40S ribosomal protein S4 [Phytophthora capsici] diamond 2328 203 0.995073891625616 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
30759939 30759939 PRJEB2333_P_NODE_2514_length_583_cov_1.600733_g1747_i0 PRJEB2333 2514 583 1.600733 9.33227339 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 118 5.58e-30   NR XP_021338074.1 1133968 g1747 i0 59.1 4.77530017152659 93 38 47.9 0 379 101 52 144 XP_021338074.1 small subunit ribosomal protein S18e [Babesia microti strain RI] diamond 2784 118 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
31480746 31480746 PRJEB2333_P_NODE_2396_length_650_cov_1.499184_g1636_i0 PRJEB2333 2396 650 1.499184 9.744696 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 179 2.69e-52   NR GLD96418.1 114742 g1636 i0 59.1 3.32307692307692 149 60 68.8 1 2 448 45 192 GLD96418.1 hypothetical protein PINS_up005101 [Pythium insidiosum] diamond 2160 179 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31676530 31676530 PRJEB2333_P_NODE_3137_length_427_cov_0.789744_g2362_i0 PRJEB2333 3137 427 0.789744 3.37220688 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 61.2 8.82e-9   NR CEO95161.1 37360 g2362 i0 78.8 0.231850117096019 33 7 23.2 0 398 300 1 33 CEO95161.1 hypothetical protein PBRA_003927 [Plasmodiophora brassicae] diamond 99 61.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;