contig_metadata
10 rows where bioproject = "PRJEB2333", tax_clade = "Opisthokonta" and tax_phylum = "Ascomycota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7363852 | 7363852 | PRJEB2333_P_NODE_2606_length_540_cov_11.176938_g1837_i0 | PRJEB2333 | 2606 | 540 | 11.176938 | 60.3554652 | Alternaria | 5598 | Fungi | Fungi | 540 | 9.29e-149 | NTclustered | gi|289449248|dbj|AB517938.1| | 5599 | g1837 | i0 | 99.661 | 66.7185185185185 | 295 | 1 | 77 | 0 | 1 | 295 | 876 | 582 | Alternaria alternata gene for 28S ribosomal RNA, partial sequence | blastn | 36028 | 545 | 0.990825688073395 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Dothideomycetes | Pleosporales | Pleosporaceae | Alternaria | Alternaria alternata | |
| 18837961 | 18837961 | PRJEB2333_P_NODE_3775_length_207_cov_1.711765_g2998_i0 | PRJEB2333 | 3775 | 207 | 1.711765 | 3.54335355 | Dothideomycetes | 147541 | Fungi | Fungi | 327 | 2.69e-85 | NTclustered | gi|2749640508|ref|XR_010715598.1| | 5022 | g2998 | i0 | 99.448 | 103.328502415459 | 181 | 0 | 87 | 1 | 1 | 181 | 3248 | 3427 | Leptosphaeria maculans 28S ribosomal RNA (IAQ61_009836), rRNA | blastn | 21389 | 327 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Dothideomycetes | Pleosporales | Leptosphaeriaceae | Plenodomus | Plenodomus lingam | |
| 22663103 | 22663103 | PRJEB2333_P_NODE_3658_length_224_cov_2.663102_g2881_i0 | PRJEB2333 | 3658 | 224 | 2.663102 | 5.96534848 | Eukaryota | 2759 | Fungi | Fungi | 196 | 8.69e-46 | NTclustered | gi|73990900|emb|AM039516.1| | 211099 | g2881 | i0 | 85.492 | 88.3794642857143 | 193 | 22 | 85 | 4 | 35 | 224 | 911 | 722 | Hanseniaspora clermontiae partial tef1 gene for translation elongation factor 1-alpha, strain CBS 8821 | blastn | 19797 | 196 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Saccharomycetes | Saccharomycodales | Saccharomycodaceae | Hanseniaspora | Hanseniaspora clermontiae | |
| 23938496 | 23938496 | PRJEB2333_P_NODE_3199_length_417_cov_2.023684_g2424_i0 | PRJEB2333 | 3199 | 417 | 2.023684 | 8.43876228 | Fungi | 4751 | Fungi | Fungi | 233 | 1.3299999999999998e-56 | NTclustered | gi|6715474|gb|AF218791.1|AF218791 | 5599 | g2424 | i0 | 100 | 51.4340527577938 | 126 | 0 | 59 | 0 | 1 | 126 | 1634 | 1509 | Alternaria alternata internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence; and 18S ribosomal RNA gene, complete sequence | blastn | 21448 | 233 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Dothideomycetes | Pleosporales | Pleosporaceae | Alternaria | Alternaria alternata | |
| 23938505 | 23938505 | PRJEB2333_P_NODE_3819_length_202_cov_2.351515_g3042_i0 | PRJEB2333 | 3819 | 202 | 2.351515 | 4.7500603 | Eukaryota | 2759 | Fungi | Fungi | 372 | 1.19e-98 | NTclustered | gi|514829572|gb|KC771883.1| | 4929 | g3042 | i0 | 100 | 83.5792079207921 | 201 | 0 | 99 | 0 | 1 | 201 | 132 | 332 | Meyerozyma guilliermondii strain SNP3S 26S ribosomal RNA gene, partial sequence | blastn | 16883 | 372 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Pichiomycetes | Serinales | Debaryomycetaceae | Meyerozyma | Meyerozyma guilliermondii | |
| 27696950 | 27696950 | PRJEB2333_P_NODE_3084_length_434_cov_1.352645_g2309_i0 | PRJEB2333 | 3084 | 434 | 1.352645 | 5.8704793 | Pichia membranifaciens | 4926 | Fungi | Fungi | 77 | 7.08e-15 | NR | GAV28409.1 | 4926 | g2309 | i0 | 64.3 | 1.88709677419355 | 56 | 20 | 38.7 | 0 | 183 | 16 | 76 | 131 | GAV28409.1 60S ribosomal protein [Pichia membranifaciens] | diamond | 819 | 77 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Pichiomycetes | Pichiales | Pichiaceae | Pichia | Pichia membranifaciens | |
| 28138887 | 28138887 | PRJEB2333_P_NODE_2585_length_548_cov_1.123288_g1816_i0 | PRJEB2333 | 2585 | 548 | 1.123288 | 6.15561824 | Nadsonia fulvescens var. elongata DSM 6958 | 857566 | Fungi | Fungi | 110 | 8.22e-27 | NR | ODQ66779.1 | 857566 | g1816 | i0 | 62.7 | 0.454379562043796 | 83 | 30 | 45.4 | 1 | 293 | 541 | 77 | 158 | ODQ66779.1 60S ribosomal protein L11-A, partial [Nadsonia fulvescens var. elongata DSM 6958] | diamond | 249 | 110 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Dipodascomycetes | Dipodascales | Nadsonia | Nadsonia fulvescens | ||
| 28732140 | 28732140 | PRJEB2333_P_NODE_2987_length_447_cov_2.239024_g2213_i0 | PRJEB2333 | 2987 | 447 | 2.239024 | 10.00843728 | Pichiomycetes | 3239874 | Fungi | Fungi | 99.4 | 6.559999999999999e-23 | NR | ANZ77480.1 | 4922 | g2213 | i0 | 52.4 | 5.46308724832215 | 103 | 38 | 69.1 | 1 | 5 | 313 | 63 | 154 | ANZ77480.1 BA75_04938T0 [Komagataella pastoris] | diamond | 2442 | 100 | 0.994 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Pichiomycetes | Pichiales | Pichiaceae | Komagataella | Komagataella pastoris | |
| 31075953 | 31075953 | PRJEB2333_P_NODE_4275_length_171_cov_1.455224_g3498_i0 | PRJEB2333 | 4275 | 171 | 1.455224 | 2.48843304 | Xylographa carneopallida | 1590122 | Fungi | Fungi | 79 | 1.89e-16 | NR | MCJ1296998.1 | 1590122 | g3498 | i0 | 62.5 | 1.96491228070175 | 56 | 21 | 98.2 | 0 | 3 | 170 | 102 | 157 | MCJ1296998.1 Rho GTPase protein rac1 [Xylographa carneopallida] | diamond | 336 | 79 | 1 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Lecanoromycetes | Baeomycetales | Xylographaceae | Xylographa | Xylographa carneopallida | |
| 32492961 | 32492961 | PRJEB2333_P_NODE_4019_length_186_cov_1.570470_g3242_i0 | PRJEB2333 | 4019 | 186 | 1.57047 | 2.9210742 | Ascomycota | 4890 | Fungi | Fungi | 85.1 | 3.69e-19 | NR | XP_069259469.1 | 28565 | g3242 | i0 | 64.5 | 19.4838709677419 | 62 | 22 | 100 | 0 | 186 | 1 | 49 | 110 | XP_069259469.1 40S ribosomal protein eS12 [Thermomyces dupontii] | diamond | 3624 | 85.5 | 0.9953216374269 | Eukaryota | Opisthokonta | Fungi | Ascomycota | Eurotiomycetes | Eurotiales | Trichocomaceae | Thermomyces | Thermomyces dupontii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;