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contig_metadata

23 rows where bioproject = "PRJEB20058" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 23 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20423466 20423466 PRJEB20058_S_NODE_4997_length_274_cov_20.291080_g4959_i0 PRJEB20058 4997 274 20.29108 55.5975592 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 363 1.02e-95   NTclustered gi|2031940840|emb|OD957768.1| 5763 g4959 i0 96.364 1.89416058394161 220 8 80 0 1 220 220 1 Naegleria fowleri Karachi_NF001 strain blastn 519 363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25517703 25517703 PRJEB20058_P_NODE_214177_length_246_cov_6.886486_g211353_i0 PRJEB20058 214177 246 6.886486 16.94075556 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 56.5 0.002   NTclustered gi|2031941174|emb|OD957839.1| 5763 g211353 i0 92.308 1.67479674796748 39 3 16 0 17 55 363 401 Naegleria fowleri Karachi_NF001 strain blastn 412 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25648934 25648934 PRJEB20058_P_NODE_105442_length_394_cov_45.741742_g102634_i0 PRJEB20058 105442 394 45.741742 180.22246348 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 446 1.4799999999999999e-120   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g102634 i0 88.267 24.5456852791878 375 41 94 2 23 394 1850 2224 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9671 446 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25650204 25650204 PRJEB20058_P_NODE_13450_length_1131_cov_4.816822_g11754_i0 PRJEB20058 13450 1131 4.816822 54.47825682 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 1480 0   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g11754 i0 90.506 10.6728558797524 1127 98 99 8 9 1131 4262 3141 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12071 1480 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
25655217 25655217 PRJEB20058_P_NODE_31802_length_743_cov_134.868035_g29295_i0 PRJEB20058 31802 743 134.868035 1002.06950005 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 292 4.03e-74   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g29295 i0 78.71 16.0080753701211 465 79 61 15 265 720 2482 2029 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11894 292 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25786707 25786707 PRJEB20058_P_NODE_142307_length_325_cov_3.359848_g139486_i0 PRJEB20058 142307 325 3.359848 10.919506 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 470 7.11e-128   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g139486 i0 94.444 52.2492307692308 306 15 94 2 1 305 3139 2835 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16981 470 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
25790905 25790905 PRJEB20058_P_NODE_249051_length_196_cov_8.459259_g246226_i0 PRJEB20058 249051 196 8.459259 16.58014764 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 204 4.42e-48   NTclustered gi|2031942541|emb|OD958147.1| 5763 g246226 i0 90.062 2.18877551020408 161 11 82 4 36 196 7 162 Naegleria fowleri Karachi_NF001 strain blastn 429 204 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26059175 26059175 PRJEB20058_P_NODE_14973_length_1072_cov_7.070227_g13173_i0 PRJEB20058 14973 1072 7.070227 75.79283344 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 167 3.73e-36   NTclustered gi|2031942577|emb|OD958156.1| 5763 g13173 i0 78.656 0.236007462686567 253 52 24 2 18 269 1 252 Naegleria fowleri Karachi_NF001 strain blastn 253 167 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26193330 26193330 PRJEB20058_P_NODE_10230_length_1303_cov_14.684380_g8769_i0 PRJEB20058 10230 1303 14.68438 191.3374714 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 664 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g8769 i0 79.286 13.8296239447429 1009 164 84 29 18 1001 3262 4250 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18020 664 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
26292559 26292559 PRJEB20058_P_NODE_124486_length_356_cov_1.732203_g121668_i0 PRJEB20058 124486 356 1.732203 6.16664268 Naegleria 5761 Heterolobosea other_Eukaryota 191 6.84e-44   NTclustered gi|2618963742|gb|OR769034.1| 5762 g121668 i0 81.2 16.7977528089888 250 36 70 7 108 356 5057 5296 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 5980 191 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26469787 26469787 PRJEB20058_P_NODE_202272_length_255_cov_0.896907_g199448_i0 PRJEB20058 202272 255 0.896907 2.28711285 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 224 4.639999999999999e-54   NTclustered gi|2031939764|emb|OD957623.1| 5763 g199448 i0 82.545 1.07843137254902 275 28 100 7 1 255 838 564 Naegleria fowleri Karachi_NF001 strain blastn 275 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32928559 32928559 PRJEB20058_P_NODE_59873_length_541_cov_16.120833_g57114_i0 PRJEB20058 59873 541 16.120833 87.21370653 Acrasis kona 1008807 Heterolobosea other_Eukaryota 128 1.85e-31   NR KAL0490498.1 1008807 g57114 i0 45.6 0.826247689463956 149 79 82.1 2 25 468 301 448 KAL0490498.1 peptide chain release factor subunit 3 [Acrasis kona] diamond 447 128 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32945837 32945837 PRJEB20058_P_NODE_81426_length_458_cov_20.501259_g78642_i0 PRJEB20058 81426 458 20.501259 93.89576622 Acrasis kona 1008807 Heterolobosea other_Eukaryota 92 1.8e-18   NR KAL0483473.1 1008807 g78642 i0 58.1 0.48471615720524 74 29 47.2 1 28 243 386 459 KAL0483473.1 4-aminobutyrate aminotransferase [Acrasis kona] diamond 222 92 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32963133 32963133 PRJEB20058_P_NODE_95090_length_419_cov_22.824022_g92289_i0 PRJEB20058 95090 419 22.824022 95.63265218 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 58.9 2.08e-7   NR XP_044566604.1 5763 g92289 i0 36.7 0.780429594272076 109 65 75.9 4 24 341 86 193 XP_044566604.1 uncharacterized protein FDP41_011752 [Naegleria fowleri] diamond 327 58.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32996690 32996690 PRJEB20058_P_NODE_28835_length_780_cov_51.752434_g26414_i0 PRJEB20058 28835 780 51.752434 403.6689852 Acrasis kona 1008807 Heterolobosea other_Eukaryota 237 1.7299999999999998e-69   NR KAL0490576.1 1008807 g26414 i0 54.2 0.873076923076923 227 89 81.9 3 720 82 474 699 KAL0490576.1 hypothetical protein AKO1_009576 [Acrasis kona] diamond 681 237 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33014140 33014140 PRJEB20058_P_NODE_93612_length_423_cov_14.348066_g90812_i0 PRJEB20058 93612 423 14.348066 60.69231918 Acrasis kona 1008807 Heterolobosea other_Eukaryota 95.9 7.11e-21   NR KAL0481739.1 1008807 g90812 i0 40.8 0.921985815602837 130 67 85.1 2 383 24 147 276 KAL0481739.1 hydroxyacylglutathione hydrolase [Acrasis kona] diamond 390 95.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33031317 33031317 PRJEB20058_P_NODE_97092_length_414_cov_27.048159_g94289_i0 PRJEB20058 97092 414 27.048159 111.97937826 Acrasis kona 1008807 Heterolobosea other_Eukaryota 112 1.33e-27   NR KAL0479067.1 1008807 g94289 i0 43.2 0.855072463768116 118 65 85.5 1 382 29 112 227 KAL0479067.1 glutathione S-transferase [Acrasis kona] diamond 354 112 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33047285 33047285 PRJEB20058_P_NODE_148021_length_316_cov_28.564706_g145199_i0 PRJEB20058 148021 316 28.564706 90.26447096 Acrasis kona 1008807 Heterolobosea other_Eukaryota 95.1 5.88e-23   NR KAL0477782.1 1008807 g145199 i0 60.8 0.70253164556962 74 29 70.3 0 49 270 25 98 KAL0477782.1 GRXC4 [Acrasis kona] diamond 222 95.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33064887 33064887 PRJEB20058_P_NODE_244197_length_206_cov_10.682759_g241372_i0 PRJEB20058 244197 206 10.682759 22.00648354 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 56.6 1.93e-8   NR CAG4715664.1 5763 g241372 i0 78.1 0.932038834951456 32 7 46.6 0 183 88 63 94 CAG4715664.1 unnamed protein product, partial [Naegleria fowleri] diamond 192 56.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
33065265 33065265 PRJEB20058_P_NODE_84597_length_448_cov_38.245478_g81808_i0 PRJEB20058 84597 448 38.245478 171.33974144 Acrasis kona 1008807 Heterolobosea other_Eukaryota 65.5 1.94e-10   NR KAL0486807.1 1008807 g81808 i0 35 0.689732142857143 103 65 69 2 416 108 23 123 KAL0486807.1 hypothetical protein AKO1_001149 [Acrasis kona] diamond 309 65.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33081183 33081183 PRJEB20058_P_NODE_109342_length_386_cov_6.849231_g106531_i0 PRJEB20058 109342 386 6.849231 26.43803166 Acrasis kona 1008807 Heterolobosea other_Eukaryota 166 5.08e-50   NR KAL0477787.1 1008807 g106531 i0 71.1 0.886010362694301 114 33 88.6 0 365 24 37 150 KAL0477787.1 ribosomal protein S15 [Acrasis kona] diamond 342 166 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33082085 33082085 PRJEB20058_P_NODE_41766_length_650_cov_27.129032_g39109_i0 PRJEB20058 41766 650 27.129032 176.338708 Acrasis kona 1008807 Heterolobosea other_Eukaryota 77.8 9.42e-13   NR KAL0478693.1 1008807 g39109 i0 34.5 0.669230769230769 145 84 64.2 4 23 439 165 304 KAL0478693.1 dual-specificity protein phosphatase PTEN [Acrasis kona] diamond 435 77.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33132830 33132830 PRJEB20058_P_NODE_173839_length_283_cov_1.603604_g171016_i0 PRJEB20058 173839 283 1.603604 4.53819932 Acrasis kona 1008807 Heterolobosea other_Eukaryota 105 1.7599999999999998e-24   NR KAL0483342.1 1008807 g171016 i0 61.2 0.901060070671378 85 29 85.9 1 281 39 321 405 KAL0483342.1 hypothetical protein AKO1_014669 [Acrasis kona] diamond 255 105 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;