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contig_metadata

28 rows where bioproject = "PRJEB20058" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJEB20058 · 28 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16599492 16599492 PRJEB20058_S_NODE_1834_length_502_cov_15.793651_g1796_i0 PRJEB20058 1834 502 15.793651 79.28412802 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 63.9 2.27e-5   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g1796 i0 100 0.123505976095618 34 0 7 0 461 494 1692 1725 Anas platyrhynchos papillomavirus 2, complete genome blastn 62 63.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
25513314 25513314 PRJEB20058_P_NODE_112433_length_379_cov_34.295597_g109620_i0 PRJEB20058 112433 379 34.295597 129.98031263 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.01   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g109620 i0 100 0.0765171503957784 29 0 8 0 1 29 3116 3088 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25514890 25514890 PRJEB20058_P_NODE_148057_length_316_cov_18.211765_g145235_i0 PRJEB20058 148057 316 18.211765 57.5491774 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.03   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g145235 i0 100 0.0886075949367089 28 0 9 0 1 28 1 28 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25516872 25516872 PRJEB20058_P_NODE_194705_length_260_cov_5.829146_g191881_i0 PRJEB20058 194705 260 5.829146 15.1557796 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.024   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g191881 i0 100 0.107692307692308 28 0 11 0 233 260 3088 3115 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25519520 25519520 PRJEB20058_P_NODE_34057_length_719_cov_30.855623_g31491_i0 PRJEB20058 34057 719 30.855623 221.85192937 Parvovirus macaca3116 3117124 Viruses Viruses 56.5 0.006   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g31491 i0 100 0.0417246175243394 30 0 4 0 690 719 30 1 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 30 56.5 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25522320 25522320 PRJEB20058_P_NODE_86849_length_442_cov_3.913386_g84060_i0 PRJEB20058 86849 442 3.913386 17.29716612 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.043   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g84060 i0 100 0.0633484162895928 28 0 6 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25522826 25522826 PRJEB20058_P_NODE_97649_length_413_cov_3.286932_g94846_i0 PRJEB20058 97649 413 3.286932 13.57502916 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.011   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g94846 i0 100 0.0702179176755448 29 0 7 0 385 413 30 2 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25612780 25612780 PRJEB20058_P_NODE_160697_length_299_cov_1.638655_g157874_i0 PRJEB20058 160697 299 1.638655 4.89957845 Tetraparvovirus 1511911 Viruses Viruses 547 2.9099999999999987e-151   NTclustered gi|353258955|gb|JF504698.1| 1096141 g157874 i0 99.666 18 299 1 100 0 1 299 3584 3286 Bovine hokovirus 2 strain HK-B38 non-structural protein (NS1), minor structural protein (VP2), and major structural protein (VP2) genes, complete cds blastn 5382 547 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
25651489 25651489 PRJEB20058_P_NODE_163914_length_295_cov_1.521368_g161091_i0 PRJEB20058 163914 295 1.521368 4.4880356 Human papillomavirus 3 10614 Viruses Viruses 540 4.79e-149   NTclustered gi|397005|emb|X74462.1| 10614 g161091 i0 99.661 1 295 1 100 0 1 295 5151 5445 Human papillomavirus type 3 genomic DNA blastn 295 540 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 2
25652078 25652078 PRJEB20058_P_NODE_178098_length_278_cov_2.442396_g175275_i0 PRJEB20058 178098 278 2.442396 6.78986088 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.026   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g175275 i0 100 0.100719424460432 28 0 10 0 251 278 3088 3115 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25654630 25654630 PRJEB20058_P_NODE_243682_length_207_cov_12.726027_g240857_i0 PRJEB20058 243682 207 12.726027 26.34287589 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.018   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g240857 i0 100 0.135265700483092 28 0 14 0 180 207 3089 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25656835 25656835 PRJEB20058_P_NODE_6114_length_1748_cov_3.627149_g5084_i0 PRJEB20058 6114 1748 3.627149 63.40256452 Bovine hokovirus 2 1096141 Viruses Viruses 2955 0   NTclustered gi|353258955|gb|JF504698.1| 1096141 g5084 i0 99.029 18.5154462242563 1648 16 94 0 1 1648 3593 5240 Bovine hokovirus 2 strain HK-B38 non-structural protein (NS1), minor structural protein (VP2), and major structural protein (VP2) genes, complete cds blastn 32365 2955 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
25658706 25658706 PRJEB20058_P_NODE_98114_length_412_cov_2.002849_g95311_i0 PRJEB20058 98114 412 2.002849 8.25173788 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.04   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g95311 i0 100 0.0679611650485437 28 0 7 0 1 28 1 28 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25789666 25789666 PRJEB20058_P_NODE_212083_length_248_cov_0.951872_g209259_i0 PRJEB20058 212083 248 0.951872 2.36064256 Bovine parvovirus 3 172297 Viruses Viruses 448 2.4499999999999996e-121   NTclustered gi|1479554551|gb|MH213742.1| 172297 g209259 i0 99.194 11.0120967741935 248 2 100 0 1 248 203 450 Bovine parvovirus 3 strain 55 putative nonstructural protein gene, partial cds blastn 2731 448 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
25886080 25886080 PRJEB20058_P_NODE_26035_length_819_cov_2.270449_g23749_i0 PRJEB20058 26035 819 2.270449 18.59497731 Tetraparvovirus 1511911 Viruses Viruses 1502 0   NTclustered gi|353258955|gb|JF504698.1| 1096141 g23749 i0 99.756 37.025641025641 819 2 100 0 1 819 2247 3065 Bovine hokovirus 2 strain HK-B38 non-structural protein (NS1), minor structural protein (VP2), and major structural protein (VP2) genes, complete cds blastn 30324 1502 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
25924100 25924100 PRJEB20058_P_NODE_170580_length_286_cov_113.200000_g167757_i0 PRJEB20058 170580 286 113.2 323.752 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.026   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g167757 i0 100 0.0979020979020979 28 0 10 0 259 286 3089 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
25926923 25926923 PRJEB20058_P_NODE_243956_length_207_cov_4.794521_g241131_i0 PRJEB20058 243956 207 4.794521 9.92465847 human papillomavirus 47 10594 Viruses Viruses 344 2.67e-90   NTclustered gi|333062|gb|M32305.1|PPH47CG 10594 g241131 i0 97.98 14.5652173913043 198 4 96 0 10 207 4562 4365 Human papillomavirus type 47 (HPV-47) +-sense strand blastn 3015 344 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 1
25927684 25927684 PRJEB20058_P_NODE_3484_length_2524_cov_5.535120_g2824_i0 PRJEB20058 3484 2524 5.53512 139.7064288 Bovine parvovirus 3 172297 Viruses Viruses 4357 0   NTclustered gi|2277478564|gb|MZ502233.1| 172297 g2824 i0 99.295 8.45562599049128 2410 17 95 0 1 2410 2691 5100 Bovine parvovirus 3 isolate BCS1/USA nonstructural protein and structural protein genes, complete cds blastn 21342 4357 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
26058667 26058667 PRJEB20058_P_NODE_138813_length_330_cov_50.869888_g135992_i0 PRJEB20058 138813 330 50.869888 167.8706304 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.009   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g135992 i0 100 0.0878787878787879 29 0 9 0 302 330 3088 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
26067070 26067070 PRJEB20058_P_NODE_99093_length_409_cov_22.341954_g96287_i0 PRJEB20058 99093 409 22.341954 91.37859186 Human papillomavirus 10566 Viruses Viruses 713 0   NTclustered gi|1480688500|gb|MH777270.1| 10566 g96287 i0 99.743 2.5281173594132 389 1 95 0 21 409 2411 2023 MAG: Human papillomavirus isolate HPV-mSK_128, complete genome blastn 1034 713 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
26159460 26159460 PRJEB20058_P_NODE_6837_length_1633_cov_3.061069_g5720_i0 PRJEB20058 6837 1633 3.061069 49.98725677 Tetraparvovirus 1511911 Viruses Viruses 2964 0   NTclustered gi|2277478573|gb|MZ502236.1| 1096141 g5720 i0 99.449 17.6148193508879 1633 8 100 1 1 1633 96 1727 Bovine hokovirus 2 isolate BCS1/USA nonstructural protein, minor structural protein, and major structural protein genes, complete cds blastn 28765 2964 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
26194496 26194496 PRJEB20058_P_NODE_127558_length_350_cov_3.903114_g124739_i0 PRJEB20058 127558 350 3.903114 13.660899 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.033   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g124739 i0 100 0.08 28 0 8 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
26197703 26197703 PRJEB20058_P_NODE_20182_length_924_cov_2.681344_g18110_i0 PRJEB20058 20182 924 2.681344 24.77561856 Bovine parvovirus 3 172297 Viruses Viruses 1663 0   NTclustered gi|2277478564|gb|MZ502233.1| 172297 g18110 i0 99.134 9.58874458874459 924 8 100 0 1 924 1725 2648 Bovine parvovirus 3 isolate BCS1/USA nonstructural protein and structural protein genes, complete cds blastn 8860 1663 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
26198079 26198079 PRJEB20058_P_NODE_210670_length_249_cov_0.946809_g207846_i0 PRJEB20058 210670 249 0.946809 2.35755441 Human papillomavirus 10566 Viruses Viruses 444 3.18e-120   NTclustered gi|1559669641|gb|MH777324.2| 10566 g207846 i0 98.795 2 249 3 100 0 1 249 6957 6709 MAG: Human papillomavirus isolate HPV-mSK_182, partial genome blastn 498 444 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
26201259 26201259 PRJEB20058_P_NODE_5750_length_1818_cov_5.514513_g4765_i0 PRJEB20058 5750 1818 5.514513 100.25384634 Bovine parvovirus 3 172297 Viruses Viruses 2985 0   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g4765 i0 99.452 8.44664466446645 1643 9 90 0 1 1643 1645 3 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 15356 2985 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
26466412 26466412 PRJEB20058_P_NODE_124648_length_355_cov_23.013605_g121830_i0 PRJEB20058 124648 355 23.013605 81.69829775 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.034   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g121830 i0 100 0.0788732394366197 28 0 8 0 1 28 2 29 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
26467999 26467999 PRJEB20058_P_NODE_159472_length_300_cov_9.506276_g156649_i0 PRJEB20058 159472 300 9.506276 28.518828 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.008   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g156649 i0 100 0.0966666666666667 29 0 10 0 272 300 30 2 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
26468728 26468728 PRJEB20058_P_NODE_177024_length_279_cov_3.889908_g174201_i0 PRJEB20058 177024 279 3.889908 10.85284332 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.026   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g174201 i0 96.875 0.114695340501792 32 0 11 1 1 31 2 33 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 32 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;