RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJEB20058" and tax_phylum = "Candidatus Rokuibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 7 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26058594 26058594 PRJEB20058_P_NODE_136989_length_334_cov_1.241758_g134169_i0 PRJEB20058 136989 334 1.241758 4.14747172 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 199 2.06e-59   NR HBH02571.1 2053607 g134169 i0 89.2 2.99101796407186 111 12 99.7 0 1 333 242 352 HBH02571.1 IS21 family transposase [Candidatus Rokuibacteriota bacterium] diamond 999 199 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
26202090 26202090 PRJEB20058_P_NODE_72782_length_488_cov_1.599532_g70007_i0 PRJEB20058 72782 488 1.599532 7.80571616 Bacteria 2 Bacteria Bacteria 266 7.420000000000001e-85   NR PYM90848.1 2053607 g70007 i0 83.9 2.85860655737705 155 25 95.3 0 7 471 1 155 PYM90848.1 MAG: adenylate/guanylate cyclase domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 1395 266 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33014078 33014078 PRJEB20058_P_NODE_85060_length_447_cov_4.779793_g82271_i0 PRJEB20058 85060 447 4.779793 21.36567471 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 192 1.08e-57   NR MBI2494646.1 2053607 g82271 i0 60.3 2.93959731543624 146 58 98 0 8 445 44 189 MBI2494646.1 ABC transporter substrate-binding protein [Candidatus Rokuibacteriota bacterium] diamond 1314 192 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33115422 33115422 PRJEB20058_P_NODE_134751_length_337_cov_24.739130_g131931_i0 PRJEB20058 134751 337 24.73913 83.3708681 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 43.9 0.0349   NR PYN83328.1 2053607 g131931 i0 32.9 0.676557863501484 76 50 67.7 1 21 248 66 140 PYN83328.1 MAG: tryptophan synthase subunit alpha [Candidatus Rokuibacteriota bacterium] diamond 228 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33149438 33149438 PRJEB20058_P_NODE_109544_length_386_cov_1.861538_g106733_i0 PRJEB20058 109544 386 1.861538 7.18553668 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 146 2.99e-40   NR MFI5329388.1 2053607 g106733 i0 85.5 1.29015544041451 83 12 64.5 0 137 385 1 83 MFI5329388.1 IS5 family transposase [Candidatus Rokuibacteriota bacterium] diamond 498 146 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33179109 33179109 PRJEB20058_P_NODE_20944_length_908_cov_3.103896_g18844_i0 PRJEB20058 20944 908 3.103896 28.18337568 Pseudomonadati 3379134 Bacteria Bacteria 57.8 3.57e-5   NR PYM18124.1 2053607 g18844 i0 42.9 0.981277533039648 70 31 20.2 2 191 9 798 867 PYM18124.1 MAG: hypothetical protein DMD78_28565, partial [Candidatus Rokuibacteriota bacterium] diamond 891 57.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
33179167 33179167 PRJEB20058_P_NODE_50632_length_591_cov_2.071698_g47903_i0 PRJEB20058 50632 591 2.071698 12.24373518 Bacteria 2 Bacteria Bacteria 335 1.1499999999999994e-107   NR PYO35660.1 2053607 g47903 i0 81.2 5 197 37 100 0 591 1 540 736 PYO35660.1 MAG: aconitate hydratase [Candidatus Rokuibacteriota bacterium] diamond 2955 337 0.99406528189911 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;