RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB20058" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25922646 25922646 PRJEB20058_P_NODE_136764_length_334_cov_3.252747_g133944_i0 PRJEB20058 136764 334 3.252747 10.86417498 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 206 1.22e-61   NR MDD3146193.1 2053586 g133944 i0 98.1 2.88323353293413 107 2 96.1 0 325 5 322 428 MDD3146193.1 diguanylate cyclase [Candidatus Rifleibacteriota bacterium] diamond 963 206 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32910927 32910927 PRJEB20058_P_NODE_199737_length_256_cov_7.948718_g196913_i0 PRJEB20058 199737 256 7.948718 20.34871808 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 49.7 1.59e-4   NR MBI4861934.1 2053586 g196913 i0 44.3 0.8203125 70 37 82 1 234 25 227 294 MBI4861934.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 210 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32911255 32911255 PRJEB20058_P_NODE_36505_length_696_cov_2.844094_g33908_i0 PRJEB20058 36505 696 2.844094 19.79489424 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 78.6 9.97e-13   NR MBI4863668.1 2053586 g33908 i0 29.2 0.900862068965517 209 135 84.9 3 677 87 372 579 MBI4863668.1 FHA domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 627 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32911523 32911523 PRJEB20058_P_NODE_83921_length_451_cov_1.369231_g81133_i0 PRJEB20058 83921 451 1.369231 6.17523181 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 77.8 6.72e-14   NR MFC1745037.1 2053586 g81133 i0 51.8 0.552106430155211 83 38 53.9 1 36 278 90 172 MFC1745037.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 249 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
33013378 33013378 PRJEB20058_P_NODE_184964_length_270_cov_6.794258_g182141_i0 PRJEB20058 184964 270 6.794258 18.3444966 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 95.9 9.12e-23   NR MBI4862875.1 2053586 g182141 i0 63.4 0.788888888888889 71 26 78.9 0 37 249 1 71 MBI4862875.1 pantetheine-phosphate adenylyltransferase [Candidatus Rifleibacteriota bacterium] diamond 213 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
33048022 33048022 PRJEB20058_P_NODE_61221_length_535_cov_8.550633_g58459_i0 PRJEB20058 61221 535 8.550633 45.74588655 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 181 2.849999999999999e-55   NR HPW60635.1 3022866 g58459 i0 97.8 1.04299065420561 93 2 52.1 0 17 295 14 106 HPW60635.1 cyclic nucleotide-binding domain-containing protein [Candidatus Rifleibacterium sp.] diamond 558 181 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;