RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB20058" and tax_phylum = "Candidatus Kryptoniota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kryptoniota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB20058 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26330069 26330069 PRJEB20058_P_NODE_12287_length_1184_cov_129.835263_g10660_i0 PRJEB20058 12287 1184 129.835263 1537.24951392 Pseudomonadati 3379134 Bacteria Bacteria 285 3.88e-91   NR WP_047134521.1 1633631 g10660 i0 57.1 1.8597972972973 247 105 62.3 1 1026 289 3 249 WP_047134521.1 type II restriction endonuclease [Candidatus Kryptonium thompsonii] diamond 2202 287 0.993031358885017 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Kryptonium Candidatus Kryptonium thompsonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;