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contig_metadata

4 rows where bioproject = "PRJEB20058" and tax_phylum = "Candidatus Deferrimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Deferrimicrobiota · 4 ✖

bioproject 1

  • PRJEB20058 · 4 ✖

analysis 1

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25883943 25883943 PRJEB20058_P_NODE_106363_length_393_cov_1.439759_g103555_i0 PRJEB20058 106363 393 1.439759 5.65825287 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 91.7 1.52e-18   NR HZW01085.1 3060586 g103555 i0 67.2 0.977099236641221 64 21 48.9 0 202 393 1 64 HZW01085.1 phosphoenolpyruvate carboxykinase (GTP) [Candidatus Deferrimicrobium sp.] diamond 384 91.7 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
32911461 32911461 PRJEB20058_P_NODE_70857_length_495_cov_1.718894_g68085_i0 PRJEB20058 70857 495 1.718894 8.5085253 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 332 4.769999999999999e-112   NR HZW01209.1 3060586 g68085 i0 94.4 0.981818181818182 162 9 98.2 0 494 9 6 167 HZW01209.1 transketolase [Candidatus Deferrimicrobium sp.] diamond 486 332 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
32995906 32995906 PRJEB20058_P_NODE_110963_length_383_cov_1.121118_g108151_i0 PRJEB20058 110963 383 1.121118 4.29388194 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 99.8 1.0300000000000001e-22   NR HZW01290.1 3060586 g108151 i0 74.7 0.587467362924282 75 19 58.7 0 225 1 1 75 HZW01290.1 glucose 1-dehydrogenase [Candidatus Deferrimicrobium sp.] diamond 225 99.8 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
33047156 33047156 PRJEB20058_P_NODE_124549_length_356_cov_1.010169_g121731_i0 PRJEB20058 124549 356 1.010169 3.59620164 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 175 6.63e-51   NR HZW00477.1 3060586 g121731 i0 84.7 0.825842696629214 98 15 82.6 0 354 61 154 251 HZW00477.1 galactokinase [Candidatus Deferrimicrobium sp.] diamond 294 175 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;