RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB20058", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJEB20058 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8949791 8949791 PRJEB20058_S_NODE_6148_length_237_cov_4.795455_g6110_i0 PRJEB20058 6148 237 4.795455 11.36522835 Chemarfal virus 260 3063286 Viruses Viruses 388 1.43e-103   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g6110 i0 99.074 0.911392405063291 216 2 91 0 22 237 1063 1278 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 216 388 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
15324827 15324827 PRJEB20058_S_NODE_1133_length_639_cov_32.302768_g1096_i0 PRJEB20058 1133 639 32.302768 206.41468752 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 1109 0   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g1096 i0 98.873 0.971830985915493 621 7 97 0 17 637 2021 2641 Malassezia restricta virus MrV40L, complete genome blastn 621 1109 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
25792738 25792738 PRJEB20058_P_NODE_57211_length_554_cov_62.369168_g54458_i0 PRJEB20058 57211 554 62.369168 345.52519072 Colorado tick fever virus 46839 Viruses Viruses 736 0   NTclustered gi|2758887253|gb|PP473574.1| 46839 g54458 i0 97.032 32.898916967509 438 11 79 2 96 531 4490 4927 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 18226 736 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
26471151 26471151 PRJEB20058_P_NODE_237456_length_220_cov_111.754717_g234631_i0 PRJEB20058 237456 220 111.754717 245.8603774 Piscine orthoreovirus 1157337 Viruses Viruses 248 2.32e-61   NTclustered gi|2634039173|gb|OR872662.1| 1157337 g234631 i0 90.099 15.4681818181818 202 5 85 10 9 196 1913 2113 Piscine orthoreovirus isolate WADDL:2021-1143 mu1 protein gene, partial cds blastn 3403 248 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;