RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB20058" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJEB20058 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25787798 25787798 PRJEB20058_P_NODE_167787_length_290_cov_2.991266_g164964_i0 PRJEB20058 167787 290 2.991266 8.6746714 Thermus phage Zuza8 3134925 Viruses Viruses 405 1.79e-108   NTclustered gi|2720503827|gb|PP554188.1| 3134925 g164964 i0 92.281 0.982758620689655 285 22 98 0 6 290 1934 1650 Thermus phage Zuza8, complete genome blastn 285 405 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Paulinoviridae Thomixvirus Thermus phage Zuza8
26066441 26066441 PRJEB20058_P_NODE_8605_length_1435_cov_5.443231_g7302_i0 PRJEB20058 8605 1435 5.443231 78.11036485 Ralstonia phage 1 NP-2 1460070 Viruses Viruses 830 0   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g7302 i0 82.195 2.71428571428571 966 171 67 1 471 1435 7312 6347 Ralstonia phage 1 NP-2014, complete sequence blastn 3895 830 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014
26202513 26202513 PRJEB20058_P_NODE_8102_length_1484_cov_47.775826_g6852_i0 PRJEB20058 8102 1484 47.775826 708.99325784 Ralstonia phage 1 NP-2 1460070 Viruses Viruses 1325 0   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g6852 i0 84.801 3.23787061994609 1329 191 89 11 48 1370 4600 3277 Ralstonia phage 1 NP-2014, complete sequence blastn 4805 1325 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;