RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB20058", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26336771 26336771 PRJEB20058_P_NODE_51575_length_585_cov_15.469466_g48842_i0 PRJEB20058 51575 585 15.469466 90.4963761 Microsporidia sp. MB-2 1984797 Fungi Fungi 1016 0   NTclustered gi|190683714|gb|EU589246.1| 541055 g48842 i0 99.117 96.7435897435897 566 4 97 1 21 585 133 698 Microsporidia sp. MB-2008 small subunit ribosomal RNA gene, partial sequence blastn 56595 1016 1 Eukaryota Opisthokonta Fungi Microsporidia         Microsporidia sp. MB-2008
33030169 33030169 PRJEB20058_P_NODE_122908_length_359_cov_2.057047_g120091_i0 PRJEB20058 122908 359 2.057047 7.38479873 Tubulinosema ratisbonensis 291195 Fungi Fungi 53.9 1.55e-5   NR RVD93178.1 291195 g120091 i0 52 0.417827298050139 50 24 41.8 0 291 142 322 371 RVD93178.1 transcription initiation factor TFIIIB [Tubulinosema ratisbonensis] diamond 150 53.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;