contig_metadata
14 rows where bioproject = "PRJEB20058", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25652640 | 25652640 | PRJEB20058_P_NODE_191762_length_263_cov_4.509901_g188938_i0 | PRJEB20058 | 191762 | 263 | 4.509901 | 11.86103963 | uncultured delta proteobacterium DeepAnt-32C6 | 357895 | Bacteria | Bacteria | 86.1 | 2.37e-12 | NTclustered | gi|82617838|gb|DQ267496.1| | 357895 | g188938 | i0 | 76.829 | 12.212927756654 | 164 | 30 | 61 | 8 | 4 | 164 | 3163 | 3005 | Uncultured delta proteobacterium DeepAnt-32C6 fosmid, complete sequence | blastn | 3212 | 86.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-32C6 | ||||||
| 25655450 | 25655450 | PRJEB20058_P_NODE_35610_length_705_cov_2.349379_g33028_i0 | PRJEB20058 | 35610 | 705 | 2.349379 | 16.56312195 | Bradymonadaceae bacterium | 2740543 | Bacteria | Bacteria | 295 | 1.0399999999999999e-95 | NR | MFU8802832.1 | 2740543 | g33028 | i0 | 72.2 | 0.825531914893617 | 194 | 54 | 82.6 | 0 | 23 | 604 | 63 | 256 | MFU8802832.1 phosphopentomutase [Bradymonadaceae bacterium] | diamond | 582 | 295 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonadaceae bacterium | ||||
| 25748809 | 25748809 | PRJEB20058_P_NODE_144698_length_321_cov_18.830769_g141877_i0 | PRJEB20058 | 144698 | 321 | 18.830769 | 60.44676849 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 424 | 5.54e-114 | NTclustered | gi|2874253888|emb|OY970063.1| | 34034 | g141877 | i0 | 92.079 | 171.031152647975 | 303 | 20 | 93 | 4 | 1 | 300 | 628182 | 628483 | MAG: uncultured delta proteobacterium isolate MFD10007.bin.1.119 genome assembly, chromosome: 1 | blastn | 54901 | 424 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 25794793 | 25794793 | PRJEB20058_P_NODE_98555_length_411_cov_1.097143_g95749_i0 | PRJEB20058 | 98555 | 411 | 1.097143 | 4.50925773 | Lujinxingiaceae bacterium | 2946527 | Bacteria | Bacteria | 120 | 6.26e-29 | NR | MBA2660728.1 | 2946527 | g95749 | i0 | 84.1 | 0.503649635036496 | 69 | 11 | 50.4 | 0 | 188 | 394 | 5 | 73 | MBA2660728.1 asparagine--tRNA ligase [Lujinxingiaceae bacterium] | diamond | 207 | 120 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Lujinxingiaceae | Lujinxingiaceae bacterium | ||||
| 25886744 | 25886744 | PRJEB20058_P_NODE_55795_length_562_cov_6.972056_g53046_i0 | PRJEB20058 | 55795 | 562 | 6.972056 | 39.18295472 | Bacteria | 2 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|296171887|emb|FN668062.2| | 34034 | g53046 | i0 | 93.11 | 90.7224199288256 | 537 | 26 | 95 | 6 | 1 | 532 | 531 | 1 | Uncultured delta proteobacterium partial 16S rRNA gene, clone ZS-4-53 | blastn | 50986 | 776 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 25924437 | 25924437 | PRJEB20058_P_NODE_178644_length_277_cov_10.662037_g175821_i0 | PRJEB20058 | 178644 | 277 | 10.662037 | 29.53384249 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 134 | 8.850000000000001e-27 | NTclustered | gi|1356668420|gb|MG520377.1| | 34034 | g175821 | i0 | 79.781 | 7.014440433213 | 183 | 37 | 66 | 0 | 82 | 264 | 175 | 357 | Uncultured delta proteobacterium clone CS110 16S ribosomal RNA gene, partial sequence | blastn | 1943 | 134 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 26058262 | 26058262 | PRJEB20058_P_NODE_129581_length_346_cov_25.522807_g126762_i0 | PRJEB20058 | 129581 | 346 | 25.522807 | 88.30891222 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 278 | 4.96e-70 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g126762 | i0 | 82.371 | 243.696531791908 | 329 | 48 | 94 | 10 | 23 | 346 | 83740 | 83417 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 84319 | 278 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 26195957 | 26195957 | PRJEB20058_P_NODE_159358_length_300_cov_25.000000_g156535_i0 | PRJEB20058 | 159358 | 300 | 25 | 75 | Microvenator marinus | 2600177 | Bacteria | Bacteria | 276 | 1.52e-69 | NTclustered | gi|1722470586|gb|CP042467.1| | 2600177 | g156535 | i0 | 84.838 | 110.133333333333 | 277 | 39 | 92 | 3 | 6 | 281 | 701552 | 701826 | Microvenator marinus strain V1718 chromosome, complete genome | blastn | 33040 | 276 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Microvenatoraceae | Microvenator | Microvenator marinus | |||
| 26332176 | 26332176 | PRJEB20058_P_NODE_170767_length_286_cov_10.484444_g167944_i0 | PRJEB20058 | 170767 | 286 | 10.484444 | 29.98550984 | uncultured delta proteobacterium DeepAnt-1F12 | 357894 | Bacteria | Bacteria | 377 | 3.84e-100 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g167944 | i0 | 93.05 | 131.520979020979 | 259 | 17 | 90 | 1 | 7 | 264 | 4040 | 3782 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 37615 | 377 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 26333251 | 26333251 | PRJEB20058_P_NODE_196463_length_259_cov_1.055556_g193639_i0 | PRJEB20058 | 196463 | 259 | 1.055556 | 2.73389004 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 124 | 4.9299999999999996e-24 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g193639 | i0 | 81.457 | 10.1814671814672 | 151 | 28 | 58 | 0 | 1 | 151 | 3786474 | 3786624 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 2637 | 124 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 26428945 | 26428945 | PRJEB20058_P_NODE_156791_length_304_cov_2.773663_g153968_i0 | PRJEB20058 | 156791 | 304 | 2.773663 | 8.43193552 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 | 2013741 | Bacteria | Bacteria | 95.1 | 1.36e-20 | NR | PKN57304.1 | 2013741 | g153968 | i0 | 60.8 | 1.56907894736842 | 79 | 30 | 78 | 1 | 43 | 279 | 2 | 79 | PKN57304.1 MAG: hypothetical protein CVU56_11720 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14] | diamond | 477 | 95.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 | ||||||
| 32944951 | 32944951 | PRJEB20058_P_NODE_154730_length_307_cov_2.048780_g151907_i0 | PRJEB20058 | 154730 | 307 | 2.04878 | 6.2897546 | Persicimonas caeni | 2292766 | Bacteria | Bacteria | 65.1 | 3.51e-10 | NR | WP_141197294.1 | 2292766 | g151907 | i0 | 82.8 | 0.283387622149837 | 29 | 5 | 28.3 | 0 | 219 | 305 | 168 | 196 | WP_141197294.1 hypothetical protein [Persicimonas caeni] | diamond | 87 | 65.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 33008294 | 33008294 | PRJEB20058_P_NODE_173259_length_283_cov_13.513514_g170436_i0 | PRJEB20058 | 173259 | 283 | 13.513514 | 38.24324462 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 48.9 | 2.49e-4 | NR | PIR23413.1 | 1973974 | g170436 | i0 | 55.3 | 0.985865724381625 | 47 | 19 | 49.8 | 1 | 281 | 141 | 160 | 204 | PIR23413.1 MAG: hypothetical protein COV44_02920 [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16] | diamond | 279 | 48.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16 | ||||||
| 33042368 | 33042368 | PRJEB20058_P_NODE_112212_length_380_cov_2.965517_g109399_i0 | PRJEB20058 | 112212 | 380 | 2.965517 | 11.2689646 | Myxococcota | 2818505 | Bacteria | Bacteria | 45.4 | 0.0171 | NR | KPJ58989.1 | 1703397 | g109399 | i0 | 37.1 | 4.05789473684211 | 62 | 38 | 48.9 | 1 | 20 | 205 | 320 | 380 | KPJ58989.1 MAG: hypothetical protein AMJ42_02355 [Deltaproteobacteria bacterium DG_8] | diamond | 1542 | 45.4 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium DG_8 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;