RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB20058", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJEB20058 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25923194 25923194 PRJEB20058_P_NODE_149012_length_315_cov_2.992126_g146190_i0 PRJEB20058 149012 315 2.992126 9.4251969 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 126 3.1e-31   NR MCB5284153.1 2030808 g146190 i0 98.5 1.25714285714286 66 1 62.9 0 116 313 301 366 MCB5284153.1 alanine racemase [Candidatus Cloacimonadota bacterium] diamond 396 126 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
26062042 26062042 PRJEB20058_P_NODE_217933_length_244_cov_1.049180_g215109_i0 PRJEB20058 217933 244 1.04918 2.5599992 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 88.2 5.17e-19   NR MDD3144465.1 2030808 g215109 i0 91.5 1.73360655737705 47 4 57.8 0 244 104 40 86 MDD3144465.1 cysteine--tRNA ligase [Candidatus Cloacimonadota bacterium] diamond 423 88.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
26198490 26198490 PRJEB20058_P_NODE_220822_length_242_cov_1.403315_g217997_i0 PRJEB20058 220822 242 1.403315 3.3960223 Candidatus Syntrophosphaera 2593013 Bacteria Bacteria 153 2.5299999999999993e-42   NR MCK9309769.1 2030808 g217997 i0 91.1 9.85537190082645 79 7 97.9 0 240 4 369 447 MCK9309769.1 [FeFe] hydrogenase H-cluster radical SAM maturase HydG [Candidatus Cloacimonadota bacterium] diamond 2385 154 0.993506493506494 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
33098402 33098402 PRJEB20058_P_NODE_13502_length_1128_cov_194.603561_g11802_i0 PRJEB20058 13502 1128 194.603561 2195.12816808 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 345 1.0099999999999997e-110   NR MDY6915097.1 2030808 g11802 i0 63.5 1.3563829787234 255 92 67.6 1 1100 339 133 387 MDY6915097.1 diadenylate cyclase [Candidatus Cloacimonadota bacterium] diamond 1530 345 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
33149618 33149618 PRJEB20058_P_NODE_143584_length_323_cov_4.213740_g140763_i0 PRJEB20058 143584 323 4.21374 13.6103802 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 184 1.32e-53   NR HPS39136.1 2030808 g140763 i0 82.7 0.96594427244582 104 18 96.6 0 11 322 230 333 HPS39136.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 312 184 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
33150360 33150360 PRJEB20058_P_NODE_49408_length_598_cov_1.886406_g46688_i0 PRJEB20058 49408 598 1.886406 11.28070788 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 369 2.8600000000000003e-122   NR MCB5284153.1 2030808 g46688 i0 98.4 1.89632107023411 189 3 94.8 0 30 596 363 551 MCB5284153.1 alanine racemase [Candidatus Cloacimonadota bacterium] diamond 1134 369 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;