RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB20058" and tax_clade = "DHVE2 group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • DHVE2 group · 1 ✖

bioproject 1

  • PRJEB20058 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32945525 32945525 PRJEB20058_P_NODE_35146_length_709_cov_6.785494_g32572_i0 PRJEB20058 35146 709 6.785494 48.10915246 Aciduliprofundum boonei T469 439481 Archaea Archaea 200 1.2399999999999998e-55   NR EDY34769.1 439481 g32572 i0 55.1 0.706629055007052 167 65 70.2 2 212 709 376 533 EDY34769.1 N-6 DNA Methylase family [Aciduliprofundum boonei T469] diamond 501 200 1 Archaea DHVE2 group Methanobacteriati Thermoplasmatota       Candidatus Aciduliprofundum Candidatus Aciduliprofundum boonei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;