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contig_metadata

7 rows where bioproject = "PRJEB20058", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 7 ✖

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJEB20058 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26058349 26058349 PRJEB20058_P_NODE_131421_length_343_cov_6.226950_g128602_i0 PRJEB20058 131421 343 6.22695 21.3584385 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 209 1.82e-49   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g128602 i0 82.5 0.699708454810496 240 40 70 2 20 258 37857 38095 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 240 209 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
32922889 32922889 PRJEB20058_P_NODE_27513_length_798_cov_1.978290_g25167_i0 PRJEB20058 27513 798 1.97829 15.7867542 Bacteria 2 Bacteria Bacteria 51.2 0.00313   NR RAL57825.1 1912928 g25167 i0 23.8 1.36842105263158 181 129 67.3 3 254 790 760 933 RAL57825.1 hypothetical protein BLD25_00510 [Candidatus Gracilibacteria bacterium GN02-872] diamond 1092 51.6 0.992248062015504 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-872
32928455 32928455 PRJEB20058_P_NODE_44897_length_627_cov_162.602473_g42211_i0 PRJEB20058 44897 627 162.602473 1019.51750571 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 113 6.190000000000001e-27   NR ATU04884.1 1540872 g42211 i0 61.4 0.421052631578947 88 34 42.1 0 178 441 2 89 ATU04884.1 hypothetical protein BKN14_00300 [Candidatus Gracilibacteria bacterium HOT-871] diamond 264 113 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
32962390 32962390 PRJEB20058_P_NODE_184986_length_270_cov_6.086124_g182163_i0 PRJEB20058 184986 270 6.086124 16.4325348 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 115 2.49e-30   NR MBX9808981.1 2044595 g182163 i0 64.4 0.966666666666667 87 30 95.6 1 2 259 5 91 MBX9808981.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 261 115 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
33116339 33116339 PRJEB20058_P_NODE_69647_length_499_cov_18.367580_g66876_i0 PRJEB20058 69647 499 18.36758 91.6542242 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 60.8 2.66e-7   NR MBP7822810.1 2044595 g66876 i0 70 0.583166332665331 50 14 29.5 1 173 27 1024 1073 MBP7822810.1 DNA polymerase III subunit alpha [Candidatus Altimarinota bacterium] diamond 291 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
33116489 33116489 PRJEB20058_P_NODE_94631_length_421_cov_1.422222_g91830_i0 PRJEB20058 94631 421 1.422222 5.98755462 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 180 2.87e-53   NR MBP7806662.1 2044595 g91830 i0 77.8 0.769596199524941 108 24 77 0 325 2 56 163 MBP7806662.1 phosphodiester glycosidase family protein [Candidatus Altimarinota bacterium] diamond 324 180 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
33132834 33132834 PRJEB20058_P_NODE_174391_length_282_cov_4.389140_g171568_i0 PRJEB20058 174391 282 4.38914 12.3773748 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 95.5 3.67e-22   NR MFA6080654.1 2044595 g171568 i0 60.8 0.840425531914894 79 29 84 1 245 9 120 196 MFA6080654.1 sigma-70 family RNA polymerase sigma factor [Candidatus Altimarinota bacterium] diamond 237 95.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;