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contig_metadata

22 rows where bioproject = "PRJEB20058", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 22 ✖

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJEB20058 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25514919 25514919 PRJEB20058_P_NODE_148681_length_315_cov_28.299213_g145859_i0 PRJEB20058 148681 315 28.299213 89.14252095 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.6 1.05e-6   NTclustered gi|470375091|ref|XM_004333111.1| 1257118 g145859 i0 95.238 11.3079365079365 42 2 13 0 217 258 1896 1855 Acanthamoeba castellanii str. Neff high molecular weight heat shock protein (ACA1_387860), partial mRNA blastn 3562 67.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25518534 25518534 PRJEB20058_P_NODE_235377_length_225_cov_6.036585_g232552_i0 PRJEB20058 235377 225 6.036585 13.58231625 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 180 8.8e-41   NTclustered gi|470410354|ref|XM_004336214.1| 1257118 g232552 i0 98.058 0.457777777777778 103 2 46 0 101 203 522 420 Acanthamoeba castellanii str. Neff DEAD/DEAH box helicase domain containing protein (ACA1_082320), partial mRNA blastn 103 180 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25654707 25654707 PRJEB20058_P_NODE_246570_length_201_cov_16.614286_g243745_i0 PRJEB20058 246570 201 16.614286 33.39471486 Ripella sp. GP2 1217115 Discosea other_Eukaryota 313 7.2599999999999985e-81   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g243745 i0 97.802 83.9303482587065 182 3 90 1 21 201 5 186 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 16870 313 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
25655714 25655714 PRJEB20058_P_NODE_39978_length_665_cov_45.185430_g37339_i0 PRJEB20058 39978 665 45.18543 300.4831095 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 129 1.5999999999999998e-32   NR XP_004345946.1 1257118 g37339 i0 51.8 0.496240601503759 110 53 49.6 0 296 625 163 272 XP_004345946.1 uncharacterized protein ACA1_183360 [Acanthamoeba castellanii str. Neff] diamond 330 129 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25656581 25656581 PRJEB20058_P_NODE_55946_length_561_cov_9.798000_g53197_i0 PRJEB20058 55946 561 9.798 54.96678 Vannella septentrionalis 197531 Discosea other_Eukaryota 848 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g53197 i0 94.434 42.9625668449198 557 22 99 6 1 553 3157 2606 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24102 848 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25749171 25749171 PRJEB20058_P_NODE_168570_length_289_cov_2.877193_g165747_i0 PRJEB20058 168570 289 2.877193 8.31508777 root 1 Root_unresolved Root_unresolved 516 7.89e-142   NTclustered gi|909719646|gb|KT185626.1| 5755 g165747 i0 99.645 43.923875432526 282 1 98 0 8 289 3661 3942 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12694 516 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25886523 25886523 PRJEB20058_P_NODE_45115_length_626_cov_4.665487_g42427_i0 PRJEB20058 45115 626 4.665487 29.20594862 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.6 3.21e-11   NR XP_004336010.1 1257118 g42427 i0 41.8 0.469648562300319 98 51 44.1 3 116 391 321 418 XP_004336010.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 294 73.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26020573 26020573 PRJEB20058_P_NODE_124460_length_356_cov_1.989831_g121642_i0 PRJEB20058 124460 356 1.989831 7.08379836 Vannellidae 95227 Discosea other_Eukaryota 603 7.419999999999997e-168   NTclustered gi|33946343|gb|AY294150.1| 197527 g121642 i0 98.256 98.3876404494382 344 5 96 1 14 356 1757 1414 Platyamoeba placida small subunit ribosomal RNA gene, partial sequence blastn 35026 603 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
26020757 26020757 PRJEB20058_P_NODE_135604_length_336_cov_2.327273_g132784_i0 PRJEB20058 135604 336 2.327273 7.81963728 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 6.62e-24   NTclustered gi|300078499|gb|GU001161.1| 197531 g132784 i0 84.921 6.07142857142857 126 15 37 4 30 153 2841 2964 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2040 124 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
26064533 26064533 PRJEB20058_P_NODE_49245_length_599_cov_3.198885_g46526_i0 PRJEB20058 49245 599 3.198885 19.16132115 Platyamoeba placida 3454475 Discosea other_Eukaryota 1057 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g46526 i0 98.497 99.7846410684474 599 9 100 0 1 599 1157 559 Platyamoeba placida actin mRNA, partial cds blastn 59771 1057 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
26066071 26066071 PRJEB20058_P_NODE_78789_length_467_cov_3.701970_g76009_i0 PRJEB20058 78789 467 3.70197 17.2881999 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 599 1.2899999999999995e-166   NTclustered gi|470402197|ref|XM_004335593.1| 1257118 g76009 i0 99.694 1.24197002141328 327 1 70 0 20 346 327 1 Acanthamoeba castellanii str. Neff ribosomal protein L35Ae, putative (ACA1_038130), partial mRNA blastn 580 599 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26200770 26200770 PRJEB20058_P_NODE_48766_length_602_cov_5.940850_g46051_i0 PRJEB20058 48766 602 5.94085 35.763917 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 315 6.879999999999998e-81   NTclustered gi|470509254|ref|XM_004349681.1| 1257118 g46051 i0 80.093 26.0797342192691 432 79 71 7 88 516 51 478 Acanthamoeba castellanii str. Neff ribosomal protein S13p/S18e, putative (ACA1_034540), partial mRNA blastn 15700 315 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26332111 26332111 PRJEB20058_P_NODE_169367_length_288_cov_3.189427_g166544_i0 PRJEB20058 169367 288 3.189427 9.18554976 Platyamoeba sp. strain CAZ7/I 325065 Discosea other_Eukaryota 394 3.839999999999999e-105   NTclustered gi|62865947|gb|AY929922.1| 325065 g166544 i0 93.657 86.6770833333333 268 10 91 5 2 262 655 922 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 24963 394 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
26333457 26333457 PRJEB20058_P_NODE_201391_length_255_cov_3.077320_g198567_i0 PRJEB20058 201391 255 3.07732 7.847166 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 124 4.839999999999999e-24   NTclustered gi|909719694|gb|KT185628.1| 5755 g198567 i0 78.607 43.1490196078431 201 33 76 9 10 204 2439 2635 Acanthamoeba castellanii isolate BCP-EM3VF21-1 mitochondrion, complete genome blastn 11003 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26335478 26335478 PRJEB20058_P_NODE_29143_length_776_cov_32.264336_g26711_i0 PRJEB20058 29143 776 32.264336 250.37124736 Vannella septentrionalis 197531 Discosea other_Eukaryota 449 2.36e-121   NTclustered gi|300078499|gb|GU001161.1| 197531 g26711 i0 81.424 46.3969072164948 576 83 73 18 1 563 2418 2982 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36004 449 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
26469192 26469192 PRJEB20058_P_NODE_187832_length_267_cov_5.101942_g185009_i0 PRJEB20058 187832 267 5.101942 13.62218514 Thecamoeba similis 242545 Discosea other_Eukaryota 377 3.55e-100   NTclustered gi|33946350|gb|AY294154.1| 242545 g185009 i0 95.359 83.1348314606742 237 11 89 0 1 237 261 25 Thecamoeba similis actin mRNA, complete cds blastn 22197 377 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
26471226 26471226 PRJEB20058_P_NODE_240504_length_214_cov_6.888889_g237679_i0 PRJEB20058 240504 214 6.888889 14.74222246 Platyamoeba contorta 354200 Discosea other_Eukaryota 86.1 1.86e-12   NTclustered gi|78523079|gb|DQ229954.1| 354200 g237679 i0 100 21.4953271028037 46 0 21 0 1 46 606 651 Platyamoeba contorta isolate W51C#5 small subunit ribosomal RNA gene, partial sequence blastn 4600 86.1 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba contorta
32979221 32979221 PRJEB20058_P_NODE_138251_length_331_cov_36.592593_g135430_i0 PRJEB20058 138251 331 36.592593 121.12148283 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.5 9.02e-4   NR XP_004344706.1 1257118 g135430 i0 41.9 0.561933534743202 62 34 56.2 2 305 120 190 249 XP_004344706.1 MORN repeat-containing protein [Acanthamoeba castellanii str. Neff] diamond 186 48.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32996514 32996514 PRJEB20058_P_NODE_214475_length_246_cov_2.621622_g211651_i0 PRJEB20058 214475 246 2.621622 6.44919012 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 112 9.02e-30   NR XP_004333102.1 1257118 g211651 i0 74 0.890243902439024 73 19 89 0 27 245 58 130 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 219 112 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32996550 32996550 PRJEB20058_P_NODE_221403_length_241_cov_22.100000_g218578_i0 PRJEB20058 221403 241 22.1 53.261 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 44.3 0.0104   NR XP_004342052.1 1257118 g218578 i0 37.5 2.45228215767635 64 34 72.2 1 223 50 387 450 XP_004342052.1 dual specificity protein kinase [Acanthamoeba castellanii str. Neff] diamond 591 44.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33116371 33116371 PRJEB20058_P_NODE_75175_length_479_cov_6.990431_g72397_i0 PRJEB20058 75175 479 6.990431 33.48416449 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 159 1.1999999999999999e-41   NR XP_004356787.1 1257118 g72397 i0 52.1 1.03340292275574 165 57 89.6 2 458 30 783 947 XP_004356787.1 IQGAPrelated protein [Acanthamoeba castellanii str. Neff] diamond 495 159 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33132522 33132522 PRJEB20058_P_NODE_126263_length_352_cov_22.195876_g123444_i0 PRJEB20058 126263 352 22.195876 78.12948352 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.7 3.02e-14   NR XP_004349661.1 1257118 g123444 i0 60.7 0.477272727272727 56 22 47.7 0 15 182 85 140 XP_004349661.1 uncharacterized protein ACA1_315750 [Acanthamoeba castellanii str. Neff] diamond 168 74.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;