RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB17675" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJEB17675 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7673907 7673907 PRJEB17675_P_NODE_1827_length_725_cov_3.392754_g1608_i0 PRJEB17675 1827 725 3.392754 24.5974665 root 1 Root_unresolved Root_unresolved 179 2.91e-51   NR QFG73901.1 1737588 g1608 i0 44.6 3.66620689655172 222 113 91 5 711 52 114 327 QFG73901.1 MAG: papain family cysteine protease [Megaviridae environmental sample] diamond 2658 180 0.994444444444444 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Megaviridae environmental sample
9914009 9914009 PRJEB17675_P_NODE_1368_length_834_cov_1.804756_g1184_i0 PRJEB17675 1368 834 1.804756 15.05166504 Mimivirus 315393 Viruses Viruses 58.4 0.002   NTclustered gi|55416625|gb|AY653733.1| 212035 g1184 i0 100 0.557553956834532 31 0 4 0 346 376 88918 88948 Acanthamoeba polyphaga mimivirus, complete genome blastn 465 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
11189205 11189205 PRJEB17675_P_NODE_25249_length_151_cov_1.034483_g24945_i0 PRJEB17675 25249 151 1.034483 1.56206933 Viruses 10239 Viruses Viruses 54.7 0.003   NTclustered gi|1774766378|gb|MN582059.1| 2656707 g24945 i0 100 0.384105960264901 29 0 19 0 105 133 9378 9350 MAG: Podoviridae sp. ct2cs2, complete genome blastn 58 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Podoviridae sp. ct2cs2
26969759 26969759 PRJEB17675_P_NODE_3022_length_567_cov_2.392857_g2753_i0 PRJEB17675 3022 567 2.392857 13.56749919 Fadolivirus algeromassiliense 3060017 Viruses Viruses 208 3.46e-62   NR YP_010803269.1 3060017 g2753 i0 60.1 0.862433862433862 163 65 86.2 0 566 78 252 414 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 489 208 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
27917482 27917482 PRJEB17675_P_NODE_22085_length_163_cov_1.562500_g21781_i0 PRJEB17675 22085 163 1.5625 2.546875 Bodo saltans virus 2024608 Viruses Viruses 43.9 0.00498   NR YP_010778165.1 2024608 g21781 i0 37.5 1.03067484662577 56 33 99.4 1 163 2 54 109 YP_010778165.1 serine/threonine-protein phosphatase [Bodo saltans virus] diamond 168 43.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
28580779 28580779 PRJEB17675_P_NODE_23787_length_156_cov_1.380165_g23483_i0 PRJEB17675 23787 156 1.380165 2.1530574 Penicillium spinulosum metavirus 1 1755795 Viruses Viruses 60.1 8.34e-9   NR ALO50153.1 1755795 g23483 i0 52 0.961538461538462 50 24 96.2 0 154 5 31 80 ALO50153.1 ORF1 [Penicillium spinulosum metavirus 1] diamond 150 60.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Metaviridae   Penicillium spinulosum metavirus 1
29938488 29938488 PRJEB17675_P_NODE_14871_length_211_cov_1.335227_g14567_i0 PRJEB17675 14871 211 1.335227 2.81732897 Homavirus sp. 2487769 Viruses Viruses 75.1 6.04e-14   NR AYV82419.1 2487769 g14567 i0 46.4 0.981042654028436 69 37 98.1 0 210 4 254 322 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 207 75.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;