RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB17675" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB17675 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24247502 24247502 PRJEB17675_P_NODE_23400_length_158_cov_0.975610_g23096_i0 PRJEB17675 23400 158 0.97561 1.5414638 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 87.8 1.03e-18   NR GKT35578.1 2918883 g23096 i0 78.8 1.9746835443038 52 11 98.7 0 158 3 124 175 GKT35578.1 Protein kinase 2 [Aduncisulcus paluster] diamond 312 87.8 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27665197 27665197 PRJEB17675_P_NODE_3764_length_505_cov_2.153191_g3479_i0 PRJEB17675 3764 505 2.153191 10.87361455 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 108 1.22e-26   NR KAG9392754.1 201153 g3479 i0 39.2 1.01584158415842 171 89 99.2 7 501 1 1 160 KAG9392754.1 Translationally controlled tumor protein [Carpediemonas membranifera] diamond 513 108 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29464329 29464329 PRJEB17675_P_NODE_23250_length_158_cov_1.626016_g22946_i0 PRJEB17675 23250 158 1.626016 2.56910528 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 39.7 0.0469   NR XP_067762115.1 348837 g22946 i0 36.5 0.987341772151899 52 32 98.7 1 156 1 45 95 XP_067762115.1 Dynein light chain [Spironucleus salmonicida] diamond 156 39.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
30089800 30089800 PRJEB17675_P_NODE_17812_length_187_cov_2.368421_g17508_i0 PRJEB17675 17812 187 2.368421 4.42894727 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 41.6 0.0464   NR EFO61736.1 658858 g17508 i0 50 1.54010695187166 34 17 54.5 0 103 2 117 150 EFO61736.1 Neurogenic locus Notch protein precursor [Giardia lamblia P15] diamond 288 42 0.990476190476191 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32277964 32277964 PRJEB17675_P_NODE_3019_length_567_cov_12.663534_g2750_i0 PRJEB17675 3019 567 12.663534 71.80223778 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 104 1.03e-24   NR KAG9392754.1 201153 g2750 i0 35.7 0.904761904761905 171 100 89.4 4 562 56 1 163 KAG9392754.1 Translationally controlled tumor protein [Carpediemonas membranifera] diamond 513 104 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;