RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB17675" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB17675 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21706 21706 PRJEB17675_P_NODE_5161_length_425_cov_2.043590_g4862_i0 PRJEB17675 5161 425 2.04359 8.6852575 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 223 6.01e-72   NR PJF20044.1 1246581 g4862 i0 77 8.83058823529412 139 32 98.1 0 423 7 18 156 PJF20044.1 hypothetical protein PSACC_00140 [Paramicrosporidium saccamoebae] diamond 3753 223 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
7673881 7673881 PRJEB17675_P_NODE_11947_length_244_cov_10.531100_g11643_i0 PRJEB17675 11947 244 10.5311 25.695884 Rozella allomycis CSF55 988480 Fungi Fungi 82.4 7.49e-17   NR EPZ34692.1 988480 g11643 i0 66.2 3.86065573770492 65 21 78.7 1 222 31 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27910943 27910943 PRJEB17675_P_NODE_5585_length_404_cov_2.536585_g5286_i0 PRJEB17675 5585 404 2.536585 10.2478034 Fungi 4751 Fungi Fungi 144 9.46e-41   NR EPZ33870.1 988480 g5286 i0 57.1 4.78960396039604 133 52 95 1 403 20 69 201 EPZ33870.1 60S ribosomal protein L13a [Rozella allomycis CSF55] diamond 1935 144 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29843624 29843624 PRJEB17675_P_NODE_16111_length_200_cov_1.648485_g15807_i0 PRJEB17675 16111 200 1.648485 3.29697 Rozella allomycis CSF55 988480 Fungi Fungi 43.9 0.00816   NR RKP22177.1 988480 g15807 i0 33.9 3.36 62 40 93 1 186 1 38 98 RKP22177.1 phosphatidylserine synthase 2 [Rozella allomycis CSF55] diamond 672 43.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;