RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB17675" and tax_phylum = "Candidatus Peregrinibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB17675 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14049779 14049779 PRJEB17675_P_NODE_13912_length_221_cov_1.290323_g13608_i0 PRJEB17675 13912 221 1.290323 2.85161383 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 235 1.81e-57   NTclustered gi|2258832001|gb|CP060225.1| 2053688 g13608 i0 89.362 3.91855203619909 188 18 85 2 35 221 626058 625872 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome blastn 866 235 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
29938491 29938491 PRJEB17675_P_NODE_18051_length_186_cov_1.317881_g17747_i0 PRJEB17675 18051 186 1.317881 2.45125866 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 48.9 9.11e-5   NR MCX6734162.1 2030811 g17747 i0 45.8 0.951612903225806 59 32 95.2 0 10 186 129 187 MCX6734162.1 MIP family channel protein [Candidatus Peregrinibacteria bacterium] diamond 177 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;