contig_metadata
11 rows where bioproject = "PRJEB17675", tax_kingdom = "Bacillati" and tax_phylum = "Cyanobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1295893 | 1295893 | PRJEB17675_P_NODE_5402_length_413_cov_1.727513_g5103_i0 | PRJEB17675 | 5402 | 413 | 1.727513 | 7.13462869 | Cyanobacteriota bacterium | 2847862 | Bacteria | Bacteria | 146 | 7.67e-41 | NR | MEN9568196.1 | 2847862 | g5103 | i0 | 85.7 | 0.610169491525424 | 84 | 12 | 61 | 0 | 162 | 413 | 134 | 217 | MEN9568196.1 hypothetical protein [Cyanobacteriota bacterium] | diamond | 252 | 146 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanobacteriota bacterium | |||||
| 10224382 | 10224382 | PRJEB17675_P_NODE_1309_length_851_cov_3.392157_g1130_i0 | PRJEB17675 | 1309 | 851 | 3.392157 | 28.86725607 | Nodularia sphaerocarpa | 137816 | Bacteria | Bacteria | 54.7 | 0.024 | NTclustered | gi|2198613447|gb|CP060140.1| | 2761619 | g1130 | i0 | 94.444 | 0.0423031727379553 | 36 | 0 | 4 | 1 | 402 | 437 | 3603569 | 3603536 | Nodularia sphaerocarpa UHCC 0038 chromosome, complete genome | blastn | 36 | 54.7 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nodulariaceae | Nodularia | Nodularia sphaerocarpa | |
| 14049770 | 14049770 | PRJEB17675_P_NODE_12392_length_238_cov_14.921182_g12088_i0 | PRJEB17675 | 12392 | 238 | 14.921182 | 35.51241316 | Synechococcus sp. CB0101 | 232348 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|1626690261|gb|CP039373.1| | 232348 | g12088 | i0 | 100 | 0.117647058823529 | 28 | 0 | 12 | 0 | 119 | 146 | 1687046 | 1687073 | Synechococcus sp. CB0101 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. CB0101 | |
| 22973689 | 22973689 | PRJEB17675_P_NODE_9039_length_296_cov_1.279693_g8735_i0 | PRJEB17675 | 9039 | 296 | 1.279693 | 3.78789128 | Synechocystis | 1142 | Bacteria | Bacteria | 126 | 1.11e-35 | NR | MEB3228129.1 | 1143 | g8735 | i0 | 77.5 | 1.62162162162162 | 80 | 18 | 81.1 | 0 | 296 | 57 | 8 | 87 | MEB3228129.1 peptidylprolyl isomerase [Synechocystis sp.] | diamond | 480 | 126 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Merismopediaceae | Synechocystis | Synechocystis sp. | |
| 27633554 | 27633554 | PRJEB17675_P_NODE_22764_length_160_cov_1.600000_g22460_i0 | PRJEB17675 | 22764 | 160 | 1.6 | 2.56 | Spirulina sp. SIO3F2 | 2607816 | Bacteria | Bacteria | 57 | 1.08e-7 | NR | NEO87708.1 | 2607816 | g22460 | i0 | 64.3 | 2.3625 | 42 | 15 | 78.8 | 0 | 158 | 33 | 702 | 743 | NEO87708.1 arginine--tRNA ligase [Spirulina sp. SIO3F2] | diamond | 378 | 57 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Spirulinales | Spirulinaceae | Spirulina | Spirulina sp. SIO3F2 | |
| 28959780 | 28959780 | PRJEB17675_P_NODE_24268_length_154_cov_1.680672_g23964_i0 | PRJEB17675 | 24268 | 154 | 1.680672 | 2.58823488 | Cyanobacteria bacterium M5B4 | 2054928 | Bacteria | Bacteria | 43.5 | 0.00581 | NR | PLS68370.1 | 2054928 | g23964 | i0 | 51.1 | 0.915584415584416 | 47 | 19 | 91.6 | 1 | 149 | 9 | 83 | 125 | PLS68370.1 MAG: hypothetical protein CV045_08290 [Cyanobacteria bacterium M5B4] | diamond | 141 | 43.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanobacteria bacterium M5B4 | |||||
| 29023057 | 29023057 | PRJEB17675_P_NODE_17768_length_188_cov_1.045752_g17464_i0 | PRJEB17675 | 17768 | 188 | 1.045752 | 1.96601376 | Cyanobacteriota bacterium | 2847862 | Bacteria | Bacteria | 45.4 | 0.00163 | NR | MDY7023971.1 | 2847862 | g17464 | i0 | 42.6 | 0.973404255319149 | 61 | 34 | 97.3 | 1 | 184 | 2 | 84 | 143 | MDY7023971.1 phosphate ABC transporter substrate-binding protein PstS [Cyanobacteriota bacterium] | diamond | 183 | 45.4 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanobacteriota bacterium | |||||
| 29615857 | 29615857 | PRJEB17675_P_NODE_4610_length_453_cov_1.844498_g4313_i0 | PRJEB17675 | 4610 | 453 | 1.844498 | 8.35557594 | Bacteria | 2 | Bacteria | Bacteria | 130 | 4.79e-34 | NR | WP_023067946.1 | 118322 | g4313 | i0 | 43.5 | 9.74834437086093 | 147 | 81 | 97.4 | 1 | 12 | 452 | 3 | 147 | WP_023067946.1 aldehyde dehydrogenase family protein, partial [Lyngbya aestuarii] | diamond | 4416 | 130 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Lyngbya | Lyngbya aestuarii | |
| 31290539 | 31290539 | PRJEB17675_P_NODE_5515_length_408_cov_1.501340_g5216_i0 | PRJEB17675 | 5515 | 408 | 1.50134 | 6.1254672 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 117 | 7.21e-30 | NR | WP_026135329.1 | 34078 | g5216 | i0 | 51.2 | 7.43382352941176 | 127 | 57 | 89.7 | 3 | 407 | 42 | 75 | 201 | WP_026135329.1 vWA domain-containing protein [Scytonema hofmannii] | diamond | 3033 | 117 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Scytonemataceae | Scytonema | Scytonema hofmannii | |
| 31866252 | 31866252 | PRJEB17675_P_NODE_17057_length_193_cov_1.493671_g16753_i0 | PRJEB17675 | 17057 | 193 | 1.493671 | 2.88278503 | Leptolyngbyaceae cyanobacterium MO_188.B28 | 3036643 | Bacteria | Bacteria | 82 | 2.2e-16 | NR | MDJ0703989.1 | 3036643 | g16753 | i0 | 55.7 | 1.89637305699482 | 61 | 27 | 94.8 | 0 | 183 | 1 | 155 | 215 | MDJ0703989.1 URC4/urg3 family protein [Leptolyngbyaceae cyanobacterium MO_188.B28] | diamond | 366 | 82 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbyaceae cyanobacterium MO_188.B28 | ||
| 32845874 | 32845874 | PRJEB17675_P_NODE_13820_length_222_cov_1.283422_g13516_i0 | PRJEB17675 | 13820 | 222 | 1.283422 | 2.84919684 | Floridanema aerugineum | 3396169 | Bacteria | Bacteria | 59.3 | 4.14e-8 | NR | WP_413273297.1 | 3396169 | g13516 | i0 | 55.3 | 2.47297297297297 | 47 | 21 | 63.5 | 0 | 222 | 82 | 333 | 379 | WP_413273297.1 DnaJ domain-containing protein [Floridanema aerugineum] | diamond | 549 | 59.3 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Aerosakkonematales | Aerosakkonemataceae | Floridanema | Floridanema aerugineum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;