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contig_metadata

13 rows where bioproject = "PRJEB17675", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 13 ✖

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJEB17675 · 13 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21660 21660 PRJEB17675_P_NODE_17941_length_186_cov_3.456954_g17637_i0 PRJEB17675 17941 186 3.456954 6.42993444 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 72.8 1.03e-13   NR CEP00723.1 37360 g17637 i0 62.3 0.983870967741935 61 22 98.4 1 3 185 58 117 CEP00723.1 hypothetical protein PBRA_001777 [Plasmodiophora brassicae] diamond 183 72.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
8638932 8638932 PRJEB17675_P_NODE_12507_length_237_cov_1.935644_g12203_i0 PRJEB17675 12507 237 1.935644 4.58747628 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99.4 1.47e-22   NR CEO99725.1 37360 g12203 i0 59.7 17.2911392405063 72 29 91.1 0 2 217 186 257 CEO99725.1 hypothetical protein PBRA_007458 [Plasmodiophora brassicae] diamond 4098 99.4 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
10224376 10224376 PRJEB17675_P_NODE_11709_length_248_cov_1.596244_g11405_i0 PRJEB17675 11709 248 1.596244 3.95868512 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 101 6.029999999999999e-24   NR CAL69925.1 37360 g11405 i0 61.7 41.1532258064516 81 31 98 0 248 6 150 230 CAL69925.1 hypothetical protein [Plasmodiophora brassicae] diamond 10206 102 0.990196078431373 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
12775243 12775243 PRJEB17675_P_NODE_2171_length_666_cov_15.239303_g1934_i0 PRJEB17675 2171 666 15.239303 101.49375798 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 234 1.82e-74   NR CEP02281.1 37360 g1934 i0 60.3 0.918918918918919 204 78 91.9 2 651 40 1 201 CEP02281.1 hypothetical protein PBRA_008865 [Plasmodiophora brassicae] diamond 612 234 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27191065 27191065 PRJEB17675_P_NODE_18202_length_185_cov_1.326667_g17898_i0 PRJEB17675 18202 185 1.326667 2.45433395 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 78.2 4.53e-15   NR CEO98898.1 37360 g17898 i0 59 1.99459459459459 61 25 98.9 0 2 184 92 152 CEO98898.1 hypothetical protein PBRA_007012 [Plasmodiophora brassicae] diamond 369 78.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28327938 28327938 PRJEB17675_P_NODE_9366_length_288_cov_2.051383_g9062_i0 PRJEB17675 9366 288 2.051383 5.90798304 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 104 1.0399999999999997e-23   NR CEP02690.1 37360 g9062 i0 56.6 3.85416666666667 83 36 86.5 0 283 35 408 490 CEP02690.1 hypothetical protein PBRA_002657 [Plasmodiophora brassicae] diamond 1110 104 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28612257 28612257 PRJEB17675_P_NODE_1087_length_921_cov_2.610609_g925_i0 PRJEB17675 1087 921 2.610609 24.04370889 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 134 8.36e-34   NR CEO95185.1 37360 g925 i0 34.1 2.64820846905537 220 122 71.7 3 229 888 34 230 CEO95185.1 hypothetical protein PBRA_003951 [Plasmodiophora brassicae] diamond 2439 134 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29748615 29748615 PRJEB17675_P_NODE_12211_length_241_cov_1.359223_g11907_i0 PRJEB17675 12211 241 1.359223 3.27572743 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 105 1.22e-24   NR CEP02333.1 37360 g11907 i0 62.5 1.99170124481328 80 30 99.6 0 240 1 139 218 CEP02333.1 hypothetical protein PBRA_008917 [Plasmodiophora brassicae] diamond 480 105 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29805529 29805529 PRJEB17675_P_NODE_6711_length_361_cov_1.708589_g6408_i0 PRJEB17675 6711 361 1.708589 6.16800629 root 1 Root_unresolved Root_unresolved 114 1.59e-26   NR CEP02690.1 37360 g6408 i0 59.1 4.38781163434903 88 36 73.1 0 2 265 689 776 CEP02690.1 hypothetical protein PBRA_002657 [Plasmodiophora brassicae] diamond 1584 115 0.991304347826087 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30570035 30570035 PRJEB17675_P_NODE_21013_length_168_cov_1.744361_g20709_i0 PRJEB17675 21013 168 1.744361 2.93052648 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 49.3 6.67e-5   NR CEO99594.1 37360 g20709 i0 35.8 0.946428571428571 53 34 94.6 0 168 10 62 114 CEO99594.1 hypothetical protein PBRA_007327 [Plasmodiophora brassicae] diamond 159 49.3 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31328682 31328682 PRJEB17675_P_NODE_136_length_1928_cov_2.825674_g113_i0 PRJEB17675 136 1928 2.825674 54.47899472 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 291 9.6e-85   NR CEO98713.1 37360 g113 i0 36.9 0.779564315352697 501 258 72.5 11 13 1410 202 679 CEO98713.1 hypothetical protein PBRA_006827 [Plasmodiophora brassicae] diamond 1503 291 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32081390 32081390 PRJEB17675_P_NODE_2338_length_643_cov_2.199013_g2096_i0 PRJEB17675 2338 643 2.199013 14.13965359 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 167 2.68e-48   NR CEO99638.1 37360 g2096 i0 53 4.23639191290824 181 83 84.4 1 642 100 18 196 CEO99638.1 hypothetical protein PBRA_007371 [Plasmodiophora brassicae] diamond 2724 167 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32625397 32625397 PRJEB17675_P_NODE_24360_length_154_cov_1.243697_g24056_i0 PRJEB17675 24360 154 1.243697 1.91529338 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 78.2 3.57e-15   NR CEO99316.1 37360 g24056 i0 58.8 0.993506493506494 51 21 99.4 0 154 2 17 67 CEO99316.1 hypothetical protein PBRA_001222 [Plasmodiophora brassicae] diamond 153 78.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;