RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB17675", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 1 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 1 ✖

bioproject 1

  • PRJEB17675 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31297047 31297047 PRJEB17675_P_NODE_8635_length_305_cov_1.333333_g8331_i0 PRJEB17675 8635 305 1.333333 4.06666565 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 107 9.12e-27   NR MBQ9740163.1 2212473 g8331 i0 54.9 11.2819672131148 91 41 89.5 0 13 285 57 147 MBQ9740163.1 triose-phosphate isomerase [Kiritimatiellia bacterium] diamond 3441 107 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;