contig_metadata
5 rows where bioproject = "PRJEB17675", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1295914 | 1295914 | PRJEB17675_P_NODE_9322_length_289_cov_1.578740_g9018_i0 | PRJEB17675 | 9322 | 289 | 1.57874 | 4.5625586 | Histomonas meleagridis | 135588 | Parabasalia | other_Eukaryota | 162 | 8.42e-49 | NR | XP_067778009.1 | 135588 | g9018 | i0 | 80.2 | 5.97923875432526 | 96 | 19 | 99.7 | 0 | 1 | 288 | 72 | 167 | XP_067778009.1 peptidyl-prolyl cis-trans isomerase [Histomonas meleagridis] | diamond | 1728 | 162 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Dientamoebidae | Histomonas | Histomonas meleagridis | |||
| 28075372 | 28075372 | PRJEB17675_P_NODE_22305_length_162_cov_1.574803_g22001_i0 | PRJEB17675 | 22305 | 162 | 1.574803 | 2.55118086 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 71.2 | 2.83e-13 | NR | XP_068351542.1 | 1144522 | g22001 | i0 | 53.7 | 4 | 54 | 25 | 100 | 0 | 1 | 162 | 89 | 142 | XP_068351542.1 small GTP-binding protein [Tritrichomonas foetus] | diamond | 648 | 71.2 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 31138685 | 31138685 | PRJEB17675_P_NODE_5335_length_415_cov_6.057895_g5036_i0 | PRJEB17675 | 5335 | 415 | 6.057895 | 25.14026425 | Trichomonas vaginalis G3 | 412133 | Parabasalia | other_Eukaryota | 43.5 | 0.0231 | NR | XP_001314726.1 | 412133 | g5036 | i0 | 44.4 | 0.325301204819277 | 45 | 21 | 32.5 | 1 | 206 | 72 | 51 | 91 | XP_001314726.1 positive regulation of ATP-dependent microtubule motor activity, plus-end-directed [Trichomonas vaginalis G3] | diamond | 135 | 43.5 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 31638455 | 31638455 | PRJEB17675_P_NODE_19096_length_179_cov_1.666667_g18792_i0 | PRJEB17675 | 19096 | 179 | 1.666667 | 2.98333393 | root | 1 | Root_unresolved | Root_unresolved | 104 | 9.429999999999999e-25 | NR | XP_001313244.1 | 412133 | g18792 | i0 | 87.5 | 19.4748603351955 | 56 | 7 | 93.9 | 0 | 178 | 11 | 335 | 390 | XP_001313244.1 ATP-dependent RNA helicase DBP3 family [Trichomonas vaginalis G3] | diamond | 3486 | 104 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 31708247 | 31708247 | PRJEB17675_P_NODE_20277_length_172_cov_1.459854_g19973_i0 | PRJEB17675 | 20277 | 172 | 1.459854 | 2.51094888 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 54.7 | 8.69e-7 | NR | XP_068364150.1 | 1144522 | g19973 | i0 | 49.1 | 0.959302325581395 | 55 | 28 | 95.9 | 0 | 2 | 166 | 248 | 302 | XP_068364150.1 AGC family protein kinase [Tritrichomonas foetus] | diamond | 165 | 54.7 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;