RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB17675", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB17675 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26843512 26843512 PRJEB17675_P_NODE_22261_length_162_cov_2.055118_g21957_i0 PRJEB17675 22261 162 2.0551179999999998 3.32929116 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 42 0.0174   NR HKB25482.1 2072417 g21957 i0 38.8 0.907407407407407 49 30 90.7 0 153 7 107 155 HKB25482.1 thioredoxin-like domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 147 42 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28201564 28201564 PRJEB17675_P_NODE_19146_length_179_cov_1.388889_g18842_i0 PRJEB17675 19146 179 1.388889 2.48611131 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 56.2 2.74e-7   NR MBI2117202.1 2072417 g18842 i0 58 4.91061452513966 50 15 73.7 1 43 174 218 267 MBI2117202.1 F0F1 ATP synthase subunit beta [Candidatus Methylomirabilota bacterium] diamond 879 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32049780 32049780 PRJEB17675_P_NODE_23498_length_157_cov_1.639344_g23194_i0 PRJEB17675 23498 157 1.639344 2.57377008 Candidatus Methylomirabilis 1170227 Bacteria Bacteria 42 0.022   NR HSD49997.1 2032687 g23194 i0 46.8 2.80891719745223 47 22 87.9 2 157 20 104 148 HSD49997.1 HRDC domain-containing protein [Candidatus Methylomirabilis sp.] diamond 441 42 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;