RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB15333", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB15333 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26716169 26716169 PRJEB15333_P_NODE_19461_length_164_cov_0.904348_g19377_i0 PRJEB15333 19461 164 0.904348 1.48313072 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 41.6 0.0306   NR HEX5012711.1 2952938 g19377 i0 48.9 0.859756097560976 47 19 80.5 2 33 164 132 176 HEX5012711.1 DUF4386 domain-containing protein [Candidatus Limnocylindrales bacterium] diamond 141 41.6 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
32877346 32877346 PRJEB15333_P_NODE_7980_length_237_cov_0.872340_g7896_i0 PRJEB15333 7980 237 0.87234 2.0674457999999998 Chloroflexia bacterium 2448782 Bacteria Bacteria 43.9 0.0129   NR HYP18623.1 2448782 g7896 i0 34.7 1.24050632911392 49 32 62 0 59 205 60 108 HYP18623.1 hypothetical protein [Chloroflexia bacterium] diamond 294 43.9 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;