RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB15333", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Bdellovibrionota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB15333 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21698328 21698328 PRJEB15333_P_NODE_18278_length_166_cov_1.803419_g18194_i0 PRJEB15333 18278 166 1.803419 2.99367554 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 257 2.7400000000000003e-64   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g18194 i0 94.578 192.048192771084 166 9 100 0 1 166 3447647 3447812 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 31880 257 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
30475594 30475594 PRJEB15333_P_NODE_7193_length_248_cov_1.703518_g7109_i0 PRJEB15333 7193 248 1.703518 4.22472464 Oligoflexia bacterium 2599941 Bacteria Bacteria 45.4 0.00327   NR NOY27214.1 2599941 g7109 i0 30.1 1.00403225806452 83 39 98 4 4 246 73 138 NOY27214.1 hypothetical protein [Oligoflexia bacterium] diamond 249 45.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;