RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB15333" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB15333 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17563710 17563710 PRJEB15333_P_NODE_16934_length_169_cov_0.866667_g16850_i0 PRJEB15333 16934 169 0.866667 1.46466723 Fimbriimonas 1005038 Bacteria Bacteria 257 2.79e-64   NTclustered gi|663071213|gb|CP007139.1| 661478 g16850 i0 97.973 124.076923076923 148 3 88 0 1 148 28958 28811 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 20969 257 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
31487067 31487067 PRJEB15333_P_NODE_14036_length_184_cov_0.911111_g13952_i0 PRJEB15333 14036 184 0.911111 1.67644424 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 45.8 4.64e-4   NR MCC6404102.1 2682144 g13952 i0 42.4 0.96195652173913 59 28 96.2 1 1 177 30 82 MCC6404102.1 DUF423 domain-containing protein [Fimbriimonadaceae bacterium] diamond 177 45.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;