RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJEB14803" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB14803 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8948496 8948496 PRJEB14803_P_NODE_36388_length_175_cov_2.800000_g35922_i0 PRJEB14803 36388 175 2.8 4.9 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 81.3 6.92e-17   NR XP_002771311.1 423536 g35922 i0 80.8 19.0114285714286 52 10 89.1 0 160 5 1 52 XP_002771311.1 14-3-3 protein, putative [Perkinsus marinus ATCC 50983] diamond 3327 81.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27854393 27854393 PRJEB14803_P_NODE_4225_length_681_cov_23.982972_g3846_i0 PRJEB14803 4225 681 23.982972 163.32403932 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 270 8.15e-89   NR XP_002778466.1 423536 g3846 i0 69.5 0.837004405286344 190 57 83.3 1 621 55 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 270 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
28454497 28454497 PRJEB14803_P_NODE_25766_length_218_cov_1.748634_g25300_i0 PRJEB14803 25766 218 1.748634 3.81202212 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 52.8 7.73e-6   NR XP_002767852.1 423536 g25300 i0 42.2 0.880733944954128 64 31 88.1 1 197 6 144 201 XP_002767852.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983] diamond 192 52.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
29111094 29111094 PRJEB14803_P_NODE_34408_length_182_cov_1.061224_g33942_i0 PRJEB14803 34408 182 1.061224 1.93142768 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 67 3.95e-11   NR KAF4682654.1 32597 g33942 i0 51.7 1.97802197802198 60 29 98.9 0 182 3 161 220 KAF4682654.1 hypothetical protein FOZ63_005285, partial [Perkinsus olseni] diamond 360 67.4 0.99406528189911 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
29363694 29363694 PRJEB14803_P_NODE_45289_length_154_cov_1.344538_g44823_i0 PRJEB14803 45289 154 1.344538 2.07058852 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 64.3 2.6e-10   NR KAF4736765.1 32597 g44823 i0 54 15.5844155844156 50 23 97.4 0 3 152 390 439 KAF4736765.1 hypothetical protein FOZ62_025886, partial [Perkinsus olseni] diamond 2400 64.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31012543 31012543 PRJEB14803_P_NODE_18075_length_277_cov_1.322314_g17609_i0 PRJEB14803 18075 277 1.322314 3.66280978 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 97.8 1.07e-21   NR KAF4730699.1 32597 g17609 i0 61.4 11.5451263537906 88 34 95.3 0 272 9 236 323 KAF4730699.1 70-kilodalton heat shock protein, partial [Perkinsus olseni] diamond 3198 97.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31448853 31448853 PRJEB14803_P_NODE_21076_length_250_cov_1.488372_g20610_i0 PRJEB14803 21076 250 1.488372 3.72093 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 96.7 2.0899999999999994e-23   NR KAF4699711.1 32597 g20610 i0 58.8 9.552 80 32 96 1 7 246 54 132 KAF4699711.1 phosphatidylinositol kinase- protein kinase tor1, partial [Perkinsus olseni] diamond 2388 97.1 0.995880535530381 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31550299 31550299 PRJEB14803_P_NODE_22476_length_239_cov_2.142157_g22010_i0 PRJEB14803 22476 239 2.142157 5.11975523 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 97.1 2.77e-21   NR KAF4666579.1 330153 g22010 i0 51.9 2.05857740585774 79 34 94.1 1 225 1 634 712 KAF4666579.1 meprin and TRAF y domain-containing protein MATH domain-containing protein [Perkinsus chesapeaki] diamond 492 97.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
32814355 32814355 PRJEB14803_P_NODE_32580_length_188_cov_1.307190_g32114_i0 PRJEB14803 32580 188 1.30719 2.4575172 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 60.5 3.92e-10   NR TEB14212.1 2494336 g32114 i0 51.9 0.861702127659574 54 25 84.6 1 3 161 33 86 TEB14212.1 hypothetical protein C9890_0692 [Perkinsus sp. BL_2016] diamond 162 60.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;