RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJEB14803" and tax_phylum = "Candidatus Omnitrophota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14803 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27380938 27380938 PRJEB14803_P_NODE_16863_length_290_cov_1.458824_g16397_i0 PRJEB14803 16863 290 1.458824 4.2305896 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 74.7 3.8e-13   NR HRK61414.1 2035772 g16397 i0 64.8 0.558620689655172 54 19 55.9 0 5 166 843 896 HRK61414.1 aconitate hydratase AcnA [Candidatus Omnitrophota bacterium] diamond 162 74.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28037569 28037569 PRJEB14803_P_NODE_5985_length_560_cov_1.636190_g5556_i0 PRJEB14803 5985 560 1.63619 9.162664 Pseudomonadati 3379134 Bacteria Bacteria 102 2.48e-21   NR MDD2752225.1 2035772 g5556 i0 40.3 2.775 176 90 93.2 5 560 39 716 878 MDD2752225.1 Ig-like domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1554 103 0.990291262135922 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28138830 28138830 PRJEB14803_P_NODE_31805_length_191_cov_1.076923_g31339_i0 PRJEB14803 31805 191 1.076923 2.05692293 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 65.9 1.29e-10   NR MCA9395584.1 2035772 g31339 i0 56.1 0.895287958115183 57 25 89.5 0 20 190 248 304 MCA9395584.1 FAD-dependent oxidoreductase [Candidatus Omnitrophota bacterium] diamond 171 65.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28675456 28675456 PRJEB14803_P_NODE_21067_length_250_cov_1.497674_g20601_i0 PRJEB14803 21067 250 1.497674 3.744185 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.9 0.0135   NR NPU95933.1 2035772 g20601 i0 38.1 0.756 63 36 73.2 2 3 185 119 180 NPU95933.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 189 43.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28833182 28833182 PRJEB14803_P_NODE_46128_length_152_cov_2.025641_g45662_i0 PRJEB14803 46128 152 2.025641 3.07897432 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 63.9 3.55e-10   NR MFH1478480.1 2035772 g45662 i0 66 3.57236842105263 47 16 92.8 0 147 7 563 609 MFH1478480.1 alanine--tRNA ligase [Candidatus Omnitrophota bacterium] diamond 543 63.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30626887 30626887 PRJEB14803_P_NODE_27853_length_207_cov_3.063953_g27387_i0 PRJEB14803 27853 207 3.063953 6.34238271 Bacteria 2 Bacteria Bacteria 119 6.949999999999999e-31   NR MCA9411513.1 2035772 g27387 i0 73.5 6.89855072463768 68 18 98.6 0 1 204 217 284 MCA9411513.1 inositol oxygenase [Candidatus Omnitrophota bacterium] diamond 1428 120 0.991666666666667 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31455263 31455263 PRJEB14803_P_NODE_32896_length_187_cov_1.289474_g32430_i0 PRJEB14803 32896 187 1.289474 2.41131638 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 71.2 4.31e-13   NR MBL7081573.1 2035772 g32430 i0 52.5 8.83957219251337 59 28 94.7 0 1 177 34 92 MBL7081573.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase [Candidatus Omnitrophota bacterium] diamond 1653 71.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32087809 32087809 PRJEB14803_P_NODE_11178_length_379_cov_1.511628_g10713_i0 PRJEB14803 11178 379 1.511628 5.72907012 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 59.3 1.88e-7   NR MCX5710104.1 2035772 g10713 i0 49 0.403693931398417 51 26 40.4 0 357 205 63 113 MCX5710104.1 tetratricopeptide repeat protein [Candidatus Omnitrophota bacterium] diamond 153 59.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;