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contig_metadata

28 rows where bioproject = "PRJEB14803", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 28 ✖

tax_kingdom 1

  • Pseudomonadati · 28 ✖

bioproject 1

  • PRJEB14803 · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21607 21607 PRJEB14803_P_NODE_7901_length_473_cov_1.552511_g7444_i0 PRJEB14803 7901 473 1.552511 7.34337703 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 59.7 4.59e-7   NR MCX7977604.1 2026715 g7444 i0 27.3 3.9323467230444 161 80 95.8 6 5 457 241 374 MCX7977604.1 DNA topoisomerase [Pseudobdellovibrionaceae bacterium] diamond 1860 59.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
8638893 8638893 PRJEB14803_P_NODE_36727_length_174_cov_3.618705_g36261_i0 PRJEB14803 36727 174 3.618705 6.2965467 Peredibacter 263370 Bacteria Bacteria 311 2.19e-80   NTclustered gi|2631252187|gb|CP139487.1| 28202 g36261 i0 98.857 385.005747126437 175 1 100 1 1 174 513365 513539 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 66991 311 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
11499451 11499451 PRJEB14803_P_NODE_20210_length_257_cov_2.009009_g19744_i0 PRJEB14803 20210 257 2.009009 5.16315313 Fluviispira sanaruensis 2493639 Bacteria Bacteria 52.8 0.023   NTclustered gi|1566196541|dbj|AP019369.1| 2493639 g19744 i0 100 0.108949416342412 28 0 11 0 117 144 24704 24677 Silvanigrellales bacterium RF1110005 79K plasmid DNA, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae Fluviispira Fluviispira sanaruensis
12464985 12464985 PRJEB14803_P_NODE_5250_length_606_cov_4.026270_g4846_i0 PRJEB14803 5250 606 4.02627 24.3991962 Peredibacter 263370 Bacteria Bacteria 787 0   NTclustered gi|2631252187|gb|CP139487.1| 28202 g4846 i0 90.18 77.1221122112211 611 50 100 10 1 606 511301 510696 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 46736 793 0.992433795712484 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
14049515 14049515 PRJEB14803_P_NODE_1772_length_1079_cov_21.513410_g1542_i0 PRJEB14803 1772 1079 21.51341 232.1296939 Peredibacter starrii 28202 Bacteria Bacteria 1345 0   NTclustered gi|2631252187|gb|CP139487.1| 28202 g1542 i0 93.137 260.020389249305 918 62 85 1 1 918 512632 511716 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 280562 1345 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
21387921 21387921 PRJEB14803_P_NODE_2757_length_864_cov_305.913148_g132_i2 PRJEB14803 2757 864 305.913148 2643.08959872 Bacteriovorax 146784 Bacteria Bacteria 1061 0   NTclustered gi|1700689994|gb|CP030035.1| 960 g132 i2 89.319 142.119212962963 852 82 98 9 1 847 1661178 1660331 Bacteriovorax stolpii strain AC01 chromosome, complete genome blastn 122791 1061 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
23938179 23938179 PRJEB14803_P_NODE_35179_length_179_cov_1.666667_g34713_i0 PRJEB14803 35179 179 1.666667 2.98333393 Oligoflexia bacterium 2599941 Bacteria Bacteria 69.7 4.07e-12   NR MCO5144427.1 2599941 g34713 i0 66 0.837988826815642 50 17 83.8 0 29 178 36 85 MCO5144427.1 bifunctional methionine sulfoxide reductase B/A protein [Oligoflexia bacterium] diamond 150 69.7 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
26684798 26684798 PRJEB14803_P_NODE_38961_length_168_cov_1.503759_g38495_i0 PRJEB14803 38961 168 1.503759 2.52631512 Oligoflexia bacterium 2599941 Bacteria Bacteria 41.6 0.0237   NR MBF0366235.1 2599941 g38495 i0 36.2 0.839285714285714 47 28 83.9 1 153 13 87 131 MBF0366235.1 hypothetical protein [Oligoflexia bacterium] diamond 141 41.6 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
26741437 26741437 PRJEB14803_P_NODE_9321_length_427_cov_3.352041_g8857_i0 PRJEB14803 9321 427 3.352041 14.31321507 Bacteriovorax 146784 Bacteria Bacteria 88.6 2.2e-19   NR OIQ20448.1 1860085 g8857 i0 37.4 2.64871194379391 123 76 85.7 1 383 18 5 127 OIQ20448.1 MAG: hypothetical protein BM556_00460 [Bacteriovorax sp. MedPE-SWde] diamond 1131 88.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp. MedPE-SWde
27406206 27406206 PRJEB14803_P_NODE_36763_length_174_cov_2.287770_g36297_i0 PRJEB14803 36763 174 2.28777 3.9807198 Bacteria 2 Bacteria Bacteria 72 1.47e-13   NR WP_284604348.1 958 g36297 i0 60 6.53448275862069 55 22 94.8 0 3 167 94 148 WP_284604348.1 MULTISPECIES: isoprenoid biosynthesis glyoxalase ElbB [Bdellovibrio] diamond 1137 72 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio  
27633489 27633489 PRJEB14803_P_NODE_25984_length_217_cov_1.538462_g25518_i0 PRJEB14803 25984 217 1.538462 3.33846254 Micavibrio sp. 2024841 Bacteria Bacteria 65.9 1.86e-10   NR MDB5491535.1 2024841 g25518 i0 50.7 1.89400921658986 69 32 94 2 204 1 310 377 MDB5491535.1 Mannitol dehydrogenase domain protein [Micavibrio sp.] diamond 411 65.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
27728474 27728474 PRJEB14803_P_NODE_27144_length_211_cov_1.420455_g26678_i0 PRJEB14803 27144 211 1.420455 2.99716005 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 66.6 9.22e-11   NR MBP5295710.1 2081706 g26678 i0 50.8 3.39810426540284 59 27 83.9 1 195 19 147 203 MBP5295710.1 IMP dehydrogenase [Bacteriovoracaceae bacterium] diamond 717 66.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
27980740 27980740 PRJEB14803_P_NODE_33545_length_184_cov_2.416107_g33079_i0 PRJEB14803 33545 184 2.416107 4.44563688 Bdellovibrionales bacterium CG1 2053517 Bacteria Bacteria 60.1 1.18e-8   NR PIT99634.1 1973927 g33079 i0 49.2 0.96195652173913 59 30 96.2 0 178 2 204 262 PIT99634.1 MAG: zinc-binding alcohol dehydrogenase family protein [Bdellovibrionales bacterium CG10_big_fil_rev_8_21_14_0_10_45_34] diamond 177 60.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium CG10_big_fil_rev_8_21_14_0_10_45_34
28043820 28043820 PRJEB14803_P_NODE_10965_length_384_cov_1.957020_g10500_i0 PRJEB14803 10965 384 1.95702 7.5149568 Oligoflexia bacterium 2599941 Bacteria Bacteria 109 4.49e-28   NR MDZ4677005.1 2599941 g10500 i0 52 1.59375 102 49 79.7 0 77 382 1 102 MDZ4677005.1 50S ribosomal protein L14 [Oligoflexia bacterium] diamond 612 109 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
28075306 28075306 PRJEB14803_P_NODE_20665_length_253_cov_2.059633_g20199_i0 PRJEB14803 20665 253 2.059633 5.21087149 Bdellovibrio sp. 28201 Bacteria Bacteria 52.4 1.74e-5   NR MBI2711507.1 28201 g20199 i0 38.8 6.41501976284585 85 51 99.6 1 1 252 494 578 MBI2711507.1 hypothetical protein [Bdellovibrio sp.] diamond 1623 52.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
28927931 28927931 PRJEB14803_P_NODE_6848_length_515_cov_1.927083_g6398_i0 PRJEB14803 6848 515 1.927083 9.92447745 Bdellovibrio sp. 28201 Bacteria Bacteria 58.2 2.72e-6   NR NUN05211.1 28201 g6398 i0 35.1 1.59029126213592 154 92 87.4 7 457 8 374 523 NUN05211.1 hypothetical protein [Bdellovibrio sp.] diamond 819 58.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
29149371 29149371 PRJEB14803_P_NODE_9709_length_416_cov_1.755906_g9245_i0 PRJEB14803 9709 416 1.755906 7.30456896 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 179 1.91e-51   NR MCB0366566.1 2053517 g9245 i0 63.5 2.97115384615385 137 49 98.8 1 411 1 308 443 MCB0366566.1 glutamine synthetase [Bdellovibrionales bacterium] diamond 1236 179 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29306748 29306748 PRJEB14803_P_NODE_32309_length_189_cov_1.298701_g31843_i0 PRJEB14803 32309 189 1.298701 2.45454489 Pseudobacteriovorax antillogorgiicola 1513793 Bacteria Bacteria 87 2.68e-18   NR WP_132321588.1 1513793 g31843 i0 67.2 1.93650793650794 61 20 96.8 0 184 2 6 66 WP_132321588.1 acyl-CoA dehydrogenase family protein [Pseudobacteriovorax antillogorgiicola] diamond 366 87 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Pseudobacteriovoracaceae Pseudobacteriovorax Pseudobacteriovorax antillogorgiicola
29306765 29306765 PRJEB14803_P_NODE_3929_length_710_cov_2.758519_g3564_i0 PRJEB14803 3929 710 2.758519 19.5854849 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 70.9 2.63e-12   NR MBX9703359.1 2654442 g3564 i0 64.3 0.177464788732394 42 15 17.7 0 668 543 1 42 MBX9703359.1 hypothetical protein [Silvanigrellaceae bacterium] diamond 126 70.9 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
30159214 30159214 PRJEB14803_P_NODE_12512_length_352_cov_2.845426_g12047_i0 PRJEB14803 12512 352 2.845426 10.01589952 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 154 5.03e-46   NR MBX9702949.1 2654442 g12047 i0 72.7 0.9375 110 29 93.8 1 352 23 14 122 MBX9702949.1 hypothetical protein [Silvanigrellaceae bacterium] diamond 330 154 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
30601677 30601677 PRJEB14803_P_NODE_17553_length_282_cov_2.024291_g17087_i0 PRJEB14803 17553 282 2.024291 5.70850062 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 42 0.0412   NR MEK6579474.1 3034175 g17087 i0 47.5 0.425531914893617 40 21 42.6 0 266 147 81 120 MEK6579474.1 hypothetical protein [Bdellovibrionota bacterium] diamond 120 42 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30696516 30696516 PRJEB14803_P_NODE_30934_length_194_cov_1.509434_g30468_i0 PRJEB14803 30934 194 1.509434 2.92830196 Bdellovibrio sp. ZAP7 2231053 Bacteria Bacteria 43.9 0.005   NR WP_142701451.1 2231053 g30468 i0 36.5 0.804123711340206 52 31 77.3 1 177 28 11 62 WP_142701451.1 hemerythrin domain-containing protein [Bdellovibrio sp. ZAP7] diamond 156 43.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. ZAP7
31296975 31296975 PRJEB14803_P_NODE_25595_length_219_cov_1.739130_g25129_i0 PRJEB14803 25595 219 1.73913 3.8086947 Silvanigrellales bacterium 2767476 Bacteria Bacteria 52.8 7.13e-6   NR MCA2960778.1 2767476 g25129 i0 48.3 1.24657534246575 58 30 79.5 0 5 178 228 285 MCA2960778.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Silvanigrellales bacterium] diamond 273 52.8 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales     Silvanigrellales bacterium
31512264 31512264 PRJEB14803_P_NODE_34956_length_180_cov_1.379310_g34490_i0 PRJEB14803 34956 180 1.37931 2.482758 Pseudomonadati 3379134 Bacteria Bacteria 61.6 3.37e-9   NR MBV2168142.1 28201 g34490 i0 52 2.55 50 24 83.3 0 154 5 1 50 MBV2168142.1 6-bladed beta-propeller [Bdellovibrio sp.] diamond 459 61.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31518521 31518521 PRJEB14803_P_NODE_1416_length_1203_cov_5.397260_g1221_i0 PRJEB14803 1416 1203 5.39726 64.9290378 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 262 1.43e-80   NR MBN22211.1 2026715 g1221 i0 41.2 2.66334164588529 359 196 87.8 8 1102 47 13 363 MBN22211.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 3204 262 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
31834548 31834548 PRJEB14803_P_NODE_1997_length_1016_cov_16.980632_g1748_i0 PRJEB14803 1997 1016 16.980632 172.52322112 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 375 1.4699999999999998e-128   NR MBX9767865.1 2053517 g1748 i0 90.5 0.593503937007874 201 19 59.4 0 244 846 1 201 MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] diamond 603 375 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31929573 31929573 PRJEB14803_P_NODE_17717_length_281_cov_0.943089_g17251_i0 PRJEB14803 17717 281 0.943089 2.65008009 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 113 1.44e-27   NR HTL10908.1 3034175 g17251 i0 60.6 4.97508896797153 94 36 99.3 1 2 280 18 111 HTL10908.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Bdellovibrionota bacterium] diamond 1398 113 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
32024650 32024650 PRJEB14803_P_NODE_39618_length_166_cov_1.832061_g39152_i0 PRJEB14803 39618 166 1.832061 3.04122126 Oligoflexus sp. 1971216 Bacteria Bacteria 82.4 1.37e-16   NR MBC7661729.1 1971216 g39152 i0 68.5 0.975903614457831 54 17 97.6 0 5 166 519 572 MBC7661729.1 multicopper oxidase domain-containing protein [Oligoflexus sp.] diamond 162 82.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;